Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eragrostis_20tef_20[genbank_20GCA_5F000970635.1_202015-04-08] 13,883 sequences; 607,317,615 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq1091 100 4e-16 >seq1091 Length=144125 Score = 100 bits (110), Expect = 4e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| ||||||| || |||||||| || ||||| | ||| |||| Sbjct 81463 ATGCAGATCTTTGTAAAGACTCTTACAGGCAAGACAATAACATTGGAGGTTGAGAGTTCC 81522 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| ||| | || || || || || || ||||| || || || ||||| Sbjct 81523 GACACCATTGACAATGTCAAGGCAAAGATCCAGGACAAGGAAGGCATCCCCCCGGATCAG 81582 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || ||||| || ||||||||||| || | |||||| | || ||| | | ||| ||||| Sbjct 81583 CAGAGGCTCATCTTTGCAGGAAAGCAGCTTGAGGATGGCCGCACACTGGCAGACTATAAC 81642 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || ||||| ||||| | || | || | ||| | ||||||| || Sbjct 81643 ATCCAGAAAGAGTCAACCCTCCACCTTGTCCTTCGTCTGAGAGGTGGCAT 81692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755324900054400