Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eragrostis_20tef_20[genbank_20GCA_5F000970635.1_202015-04-08] 13,883 sequences; 607,317,615 total letters Query= NC_004167.1 Length=39325 Score E Sequences producing significant alignments: (Bits) Value seq9883 102 2e-17 >seq9883 Length=2414 Score = 102 bits (112), Expect = 2e-17 Identities = 114/152 (75%), Gaps = 3/152 (2%) Strand=Plus/Minus Query 20621 TGGCACTTTACAGTAGACGACAAAGAGATTTATCAGCATCTGCCATTAAATGAGAACGGC 20680 |||||||||||||||||||| ||| | || ||||| || || ||| ||||||||||| Sbjct 1721 TGGCACTTTACAGTAGACGATAAACAAATCTATCAACACCTTCCAACTAATGAGAACGGA 1662 Query 20681 TGGCACGCGGGAGACGGAAACCGCGGAACCGGGAACCGGAAATCTATCGGCATTGAAATC 20740 |||||||| ||||| || || ||| |||| ||||| | ||||| || || |||||| Sbjct 1661 TGGCACGCAGGAGATGGGAA---TGGACCCGGAAACCGTGAGTCTATTGGTATCGAAATC 1605 Query 20741 TGTGAGAATAGCGATGGAGATTTTGAGAAAGC 20772 || || |||||||| | | | ||||| Sbjct 1604 GCTGTAAACCAAGATGGAGACTATAATAAAGC 1573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 125697673986002