Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eragrostis_20tef_20[genbank_20GCA_5F000970635.1_202015-04-08] 13,883 sequences; 607,317,615 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq1091 93.3 3e-14 >seq1091 Length=144125 Score = 93.3 bits (102), Expect = 3e-14 Identities = 149/213 (70%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 33161 ACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCC 33220 ||||| || | |||||||| || || ||||||||||||| ||| || || || ||| Sbjct 81899 ACCAAGTGAAGAGTCGACTCCTTCTGGATATTGTAATCAGCCAATGTGCGTCCATCCTCC 81840 Query 33221 AATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTC---G 33277 | ||||||||| ||| || | | |||||||| | || ||||| || || || | Sbjct 81839 AGCTGCTTTCCAGCAAAGATGAGTCTCTGCTGGTCAGGTGGGATGCCCTCCTTATCCTGG 81780 Query 33278 CTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTT 33337 | ||||| || || | | ||| ||||| | | ||| || |||||||| || Sbjct 81779 ATCTTCGCC---TTCACATTATCAATTGTGTCAGAGCTCTCAACCTCAAGAGTTATGGTC 81723 Query 33338 TTTCCCGTAAGAGTTTTTACGAAAATTTGCATG 33370 ||||| ||||| || || || ||||| |||||| Sbjct 81722 TTTCCAGTAAGGGTCTTCACAAAAATCTGCATG 81690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318723663128934