Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eragrostis_20tef_20[genbank_20GCA_5F000970635.1_202015-04-08] 13,883 sequences; 607,317,615 total letters Query= NC_007066.1 Length=138715 Score E Sequences producing significant alignments: (Bits) Value seq9973 87.8 2e-12 >seq9973 Length=2273 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/216 (69%), Gaps = 4/216 (2%) Strand=Plus/Minus Query 91540 GAGACCCTGTTAAAATTATTTGCGGAGACCCTGATGCAGACACTGAATATGAACGTAAAG 91599 ||||||||||| ||| || || |||| || ||| | || ||| ||||||||||| Sbjct 1008 GAGACCCTGTTCTTATTCTTACTGGTAACCCAGAAGCAAAAACAGAACTTGAACGTAAAG 949 Query 91600 GTGCAGTAGAAGTGCTTTGGGATACATTTGGAGGTACTGAAACTGAAAAAGGGTACAAAG 91659 | | | || | | ||||||| ||||| || || ||||| || || || ||| Sbjct 948 GACTAATTGAGGCTTTATGGGATATCTTTGGTGGAACAATTACTGAGAAGGGTTATAAAC 889 Query 91660 TATTAGATGAACATGTAGGATTAATTTATGGAGACTCTATTAACTATGAACGTGCTCAAC 91719 |||||||| ||| | || ||| ||||| |||||||||| ||| ||||| || Sbjct 888 TATTAGATACTCATATTGGTGCAATCTATGGTGACTCTATTACTCTTGAGCGTGCAAAAG 829 Query 91720 AAAT--TTGTGAAGGATTAAAAGAAAAAGGTTTTGC 91753 || ||| |||| ||| |||||||||| ||||| Sbjct 828 CTATTGTTGAGAAG--TTAGAAGAAAAAGGCTTTGC 795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 443682990999000