Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eragrostis_20tef_20[genbank_20GCA_5F000970635.1_202015-04-08] 13,883 sequences; 607,317,615 total letters Query= NC_011167.1 Length=53104 Score E Sequences producing significant alignments: (Bits) Value seq13197 179 1e-40 >seq13197 Length=1061 Score = 179 bits (198), Expect = 1e-40 Identities = 157/195 (81%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 18042 AAACAAGAACAAACAGTTATTGTCGGTCATTTAATCAACAATGTTATTGGATTAGAATTA 18101 ||||||||||||||||||||| ||||| | ||||||||||| || | ||| | ||||| Sbjct 150 AAACAAGAACAAACAGTTATTATCGGTAAGTTAATCAACAACATTCTCGGAGTGGAATTG 209 Query 18102 GTTAAGCAACACATTGATCCACAGAAATTAGAGAAGGCTGTAGCTTTGCATAATGAAATG 18161 || ||| |||||||||||||||||||| | ||||||||||| ||| |||||||| |||| Sbjct 210 GTGAAGGAACACATTGATCCACAGAAACTTGAGAAGGCTGTTGCTATGCATAATATAATG 269 Query 18162 AATGATGATATGACGCCA----AAACAGTGTCGAGAGGCTCTTATTAGTGCGTTGGATAA 18217 |||||||||||||| ||| ||||| |||| || |||||||||| ||| | || Sbjct 270 AATGATGATATGACACCAAGGGAAACA----AGAGAAGCGCTTATTAGTGTGTTAGGTAG 325 Query 18218 AACAATTGATGAGTT 18232 | | || ||||| || Sbjct 326 AGCGATAGATGAATT 340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 169783204819436