Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eragrostis_20tef_20[genbank_20GCA_5F000970635.1_202015-04-08] 13,883 sequences; 607,317,615 total letters Query= NC_011523.1 Length=14398 Score E Sequences producing significant alignments: (Bits) Value seq13765 143 2e-30 >seq13765 Length=656 Score = 143 bits (158), Expect = 2e-30 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 11224 GGGTTACGTTTTACAAGTGGTTTCCGTCCTGGATCAAAAGGACCGAGCGGAAAAGCCGAT 11283 || || || || ||||| || | ||| || || || | ||||| || || | | | ||| Sbjct 515 GGTTTGCGATTCACAAGCGGATACCGCCCCGGTTCTACCGGACCAAGTGGGAGACCGGAT 456 Query 11284 AGCCATTCCCAAGGCATGGCAATGGACTTTGCAGGGAATCCCGCTCAAATGGCTGTCTTT 11343 |||||||||||||||||||| |||||||| || || | | |||||| | ||| Sbjct 455 AGCCATTCCCAAGGCATGGCTATGGACTTCGCGGGTTCAAAAGATAAAATGGACGAATTT 396 Query 11344 GCCGAATGGGCGAAAAAGTCGGGTCTCTTTTCAGAAGTGTTATATAAAACGGCTGGACAC 11403 || |||||||||||| ||| || ||| | |||||||||| |||||||||| ||| Sbjct 395 GCAAAATGGGCGAAAACGTCACCGCTATTTACGGAAGTGTTATGGCAAACGGCTGGGCAC 336 Query 11404 TACGATCATGTACATGTGGGCTGGCAAGA 11432 |||||||||||||| || || |||||||| Sbjct 335 TACGATCATGTACACGTCGGGTGGCAAGA 307 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 45947823170769