Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eragrostis_20tef_20[genbank_20GCA_5F000970635.1_202015-04-08] 13,883 sequences; 607,317,615 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq3204 91.5 1e-13 >seq3204 Length=64717 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 39492 GCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGC 39551 ||| || || | ||| || ||||| || | |||| ||| || || || || || || || Sbjct 610 GCCACCACGGAGACGAAGCACCAAGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCCGC 551 Query 39552 CAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGG 39611 || ||| |||| |||| ||| || ||| |||| || | ||||||||| || | ||| Sbjct 550 CAGGGTACGTCCATCCTCCAGTTGCTTGCCGGCAAAGATAAGACGCTGCTGGTCTGGGGG 491 Query 39612 TACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCG-CTACTGTGTCTGCGCTTTCCA 39670 | ||| || ||||| || ||| || | ||| | | | |||||| | |||| Sbjct 490 AATGCCCTCCTTGTCCTGGATCTTTGCCTTCA-CGTTGTCGATTGTGTCAGAAGACTCCA 432 Query 39671 CGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 | |||| || || || ||||| |||| || || |||||||||||||| Sbjct 431 CCTCCAGGGTGATGGTCTTACCAGTTAGGGTCTTGACGAAGATCTGCAT 383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347310825389339