Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eragrostis_20tef_20[genbank_20GCA_5F000970635.1_202015-04-08] 13,883 sequences; 607,317,615 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq2221 84.2 3e-11 seq491 84.2 3e-11 >seq2221 Length=91375 Score = 84.2 bits (92), Expect = 3e-11 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 182996 TACAATGCAGATTTTGATGGAGATGAAATGAATTTACATGTTCCTCAGTCGTATGAAGCT 183055 |||||||| |||||||| ||||||||||||||| | |||||||| ||||||||||| || Sbjct 75457 TACAATGCTGATTTTGACGGAGATGAAATGAATATGCATGTTCCCCAGTCGTATGAGACT 75516 Query 183056 ACCGCTGAA 183064 | |||||| Sbjct 75517 AGAGCTGAA 75525 >seq491 Length=205423 Score = 84.2 bits (92), Expect = 3e-11 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 182996 TACAATGCAGATTTTGATGGAGATGAAATGAATTTACATGTTCCTCAGTCGTATGAAGCT 183055 |||||||| |||||||| ||||||||||||||| | |||||||| ||||||||||| || Sbjct 3860 TACAATGCTGATTTTGACGGAGATGAAATGAATATGCATGTTCCCCAGTCGTATGAGACT 3801 Query 183056 ACCGCTGAA 183064 | |||||| Sbjct 3800 AGAGCTGAA 3792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658288942354680