Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eragrostis_20tef_20[genbank_20GCA_5F000970635.1_202015-04-08] 13,883 sequences; 607,317,615 total letters Query= NC_016657.1 Length=47055 Score E Sequences producing significant alignments: (Bits) Value seq6788 111 5e-20 >seq6788 Length=15930 Score = 111 bits (122), Expect = 5e-20 Identities = 135/184 (73%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 36765 CCAGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGACAGGCTCACGAATACCATCT 36824 |||||||| || ||||||||||| ||||| | || || |||||||||||||||||||| Sbjct 6476 CCAGAGATAATATTGTTTCCATAAAGTAAAGAACCAGAAACAGGCTCACGAATACCATCA 6535 Query 36825 ATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAATGCTGTCACTGCTGTTAAAAGT 36884 ||||| || ||||| ||||| | || || || | |||| | | ||| || || | Sbjct 6536 ATATCTACTGGAGGAGCAGCGATGAAGGCGATAATAAATACGGAAGTTGCGGTCAATAAG 6595 Query 36885 GCAGGGATCATTAGTACCCCAAACCACCCCACATAGAGGCGGTTGTTTGTACTTGTAACC 36944 | ||||||||| | || |||||||| || | || || || || | || || || | | Sbjct 6596 GTAGGGATCATCAAAACACCAAACCATCCGATGTAAAGACGATTTTCGGTGCTAGTTATC 6655 Query 36945 CAGT 36948 |||| Sbjct 6656 CAGT 6659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150429595993582