Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eragrostis_20tef_20[genbank_20GCA_5F000970635.1_202015-04-08] 13,883 sequences; 607,317,615 total letters Query= NC_016658.1 Length=47741 Score E Sequences producing significant alignments: (Bits) Value seq6788 114 4e-21 >seq6788 Length=15930 Score = 114 bits (126), Expect = 4e-21 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 5987 CCTGATATGATGTTGTTTCCATAGAGTAGAGATCCTGCGACGGGTTCACGTATGCCGTCG 6046 || || || || ||||||||||| |||| ||| || | || || ||||| || || || Sbjct 6476 CCAGAGATAATATTGTTTCCATAAAGTAAAGAACCAGAAACAGGCTCACGAATACCATCA 6535 Query 6047 ATGTCGACTGGGGGTGCAGCTACGAATGCTAATATAAATGCAGTAGTTGCGGTTAAGAGT 6106 || || ||||| || ||||| | ||| || | |||||| | | ||||||||| || | Sbjct 6536 ATATCTACTGGAGGAGCAGCGATGAAGGCGATAATAAATACGGAAGTTGCGGTCAATAAG 6595 Query 6107 GCGGGTATCATTAAGACACCAAACCACCCCACATAGAGGCGGTTGTTGGTGCTAGTAACC 6166 | || ||||| || ||||||||||| || | || || || || | ||||||||| | | Sbjct 6596 GTAGGGATCATCAAAACACCAAACCATCCGATGTAAAGACGATTTTCGGTGCTAGTTATC 6655 Query 6167 CAGTCACAGAA 6177 |||| ||||| Sbjct 6656 CAGTTGCAGAA 6666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152624434091538