Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eragrostis_20tef_20[genbank_20GCA_5F000970635.1_202015-04-08] 13,883 sequences; 607,317,615 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq13288 93.3 1e-13 >seq13288 Length=1052 Score = 93.3 bits (102), Expect = 1e-13 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 284183 TATGGGGATGTGGTGAAATTGGCAGACACGCCAGATTTAGGTTCTGGTTCTTCGGAGTGC 284242 |||| ||| |||||| ||||||||||||||| ||| ||||| ||| || |||||| ||| Sbjct 1032 TATGCGGACGTGGTGGAATTGGCAGACACGCTAGACTTAGGATCTAGTGCTTCGGCGTGA 973 Query 284243 GAGTTCGAGTCTCGCCATCCCCACCATATTTGGAGTCTTAC 284283 ||||||||||||| || ||| | | || ||||| |||| Sbjct 972 GAGTTCGAGTCTCTCCGTCCGTATCTAATGTGGAGGGTTAC 932 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1147386271281734