Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eragrostis_20tef_20[genbank_20GCA_5F000970635.1_202015-04-08] 13,883 sequences; 607,317,615 total letters Query= NC_019407.1 Length=218929 Score E Sequences producing significant alignments: (Bits) Value seq2067 86.0 9e-12 >seq2067 Length=96128 Score = 86.0 bits (94), Expect = 9e-12 Identities = 101/136 (74%), Gaps = 12/136 (9%) Strand=Plus/Plus Query 80552 AAGGCTCAGGCGCCGGTCGAGCCGAAGCCGCCCGCGCCCCGTTCGGTGTCGTCCAGGCTA 80611 ||||||||| ||||||| || ||||| || ||| |||| || ||||| |||||||| Sbjct 57556 AAGGCTCAGACGCCGGTGGATCCGAACCCACCCTCGCCGCGCACGGTGGCGTCCAGGTCC 57615 Query 80612 TCGACCTCGACGACC------GGCACGATCAGGCACTGTTCGAGGATGATCTGGGCGATG 80665 || ||||| ||||| | | |||||| ||| || ||| ||||| |||||| Sbjct 57616 TCCACCTCCGCGACCTCCGGCGTCGCGATCAC---CTG---GATGATCATCTGCGCGATG 57669 Query 80666 CGATCGCCGGGCTTGA 80681 || ||||||||||||| Sbjct 57670 CGGTCGCCGGGCTTGA 57685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 700323246560520