Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eragrostis_20tef_20[genbank_20GCA_5F000970635.1_202015-04-08] 13,883 sequences; 607,317,615 total letters Query= NC_019443.1 Length=172879 Score E Sequences producing significant alignments: (Bits) Value seq6788 102 9e-17 >seq6788 Length=15930 Score = 102 bits (112), Expect = 9e-17 Identities = 126/171 (74%), Gaps = 6/171 (4%) Strand=Plus/Minus Query 162523 GACAATCGCATCTATGTCGGTTGGTTCGGTGTCTTGATGATCCCTTGCTTGCTCGCAGCA 162582 || ||||| | || |||| ||||| ||||| |||||||||||| ||| | | Sbjct 6642 GAAAATCGTCTTTACATCGGATGGTTTGGTGTTTTGATGATCCCTACCTTATT---GACC 6586 Query 162583 GCAACTTGC---TTCATCATTGCATTCATTGCAGCACCTCCAGTTGATATCGATGGTATC 162639 ||||||| | || || || || ||||| || || |||||||| ||||| |||||||| Sbjct 6585 GCAACTTCCGTATTTATTATCGCCTTCATCGCTGCTCCTCCAGTAGATATTGATGGTATT 6526 Query 162640 AGAGAACCTGTTGCAGGTTCACTTCTCTATGGTAACAACATCATCTCTGGT 162690 | || |||||| | ||||| | || ||||| ||||| || ||||||||| Sbjct 6525 CGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTATCTCTGGT 6475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552988819046520