Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eragrostis_20tef_20[genbank_20GCA_5F000970635.1_202015-04-08] 13,883 sequences; 607,317,615 total letters Query= NC_019448.1 Length=139806 Score E Sequences producing significant alignments: (Bits) Value seq9973 93.3 4e-14 >seq9973 Length=2273 Score = 93.3 bits (102), Expect = 4e-14 Identities = 165/241 (68%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 135257 GAGACCCTGTTAAGATTATTTGTGGTGACCCTGATGCAGATACTGAGTATGAACGTAAAG 135316 ||||||||||| ||| || |||| |||| || ||| | || || ||||||||||| Sbjct 1008 GAGACCCTGTTCTTATTCTTACTGGTAACCCAGAAGCAAAAACAGAACTTGAACGTAAAG 949 Query 135317 GTGCTGTAGAAGTACTTTGGGATACTTTTGGAGGTACTGAAACTGAAAAAGGATATAAAG 135376 | | || | | ||||||| ||||| || || ||||| || || |||||| Sbjct 948 GACTAATTGAGGCTTTATGGGATATCTTTGGTGGAACAATTACTGAGAAGGGTTATAAAC 889 Query 135377 TACTAGATGAACATGTAGGATTAATCTATGGTGATTCTATTAACTATGAGCGTGCTCAGC 135436 || ||||| ||| | || |||||||||||| ||||||| ||||||||| | Sbjct 888 TATTAGATACTCATATTGGTGCAATCTATGGTGACTCTATTACTCTTGAGCGTGCAAAAG 829 Query 135437 AAATTTGTGAGGGATTAAAAGCAAAAGGTTTTGCAAGTATTAACGTTGTATTAGGTGTAG 135496 ||| |||| ||| ||| |||||| ||||| | |||||||| || || || | Sbjct 828 CTATTGTTGAGAAGTTAGAAGAAAAAGGCTTTGCTTCAACAAACGTTGTTTTCGGCGTGG 769 Query 135497 G 135497 | Sbjct 768 G 768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447173585144880