Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eragrostis_20tef_20[genbank_20GCA_5F000970635.1_202015-04-08] 13,883 sequences; 607,317,615 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq3204 84.2 2e-11 >seq3204 Length=64717 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || || || || || |||| ||||| ||||| ||| || ||| |||| Sbjct 383 ATGCAGATCTTCGTCAAGACCCTAACTGGTAAGACCATCACCCTGGAGGTGGAGTCTTCT 442 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | | | ||| ||| ||| ||||| ||||| | ||| ||| || Sbjct 443 GACACAATCGACAACGTGAAGGCAAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAG 502 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||| | ||||||||||| ||||| ||| |||| ||| || |||| || || ||| Sbjct 503 CAGCGTCTTATCTTTGCCGGCAAGCAACTGGAGGATGGACGTACCCTGGCGGACTACAAC 562 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGT 28762 || || || ||||| ||||| ||| |||| Sbjct 563 ATCCAGAAGGAATCCACTCTCCACTTGGT 591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425332821906657