Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eragrostis_20tef_20[genbank_20GCA_5F000970635.1_202015-04-08] 13,883 sequences; 607,317,615 total letters Query= NC_020855.1 Length=192497 Score E Sequences producing significant alignments: (Bits) Value seq6788 107 2e-18 >seq6788 Length=15930 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 8682 ACCAGAGATGATGTTGTTTCCATACATGAATGAACCTGCAACAGGTTCACGAATACCGTC 8741 ||||||||| || ||||||||||| | || ||||| | |||||| ||||||||||| || Sbjct 6475 ACCAGAGATAATATTGTTTCCATAAAGTAAAGAACCAGAAACAGGCTCACGAATACCATC 6534 Query 8742 GATATCGACAGGTGGAGCAGCAATAAATGCCACGATAAAGCAAGTAGCAGCAGCTAACAA 8801 ||||| || || |||||||| || || || | ||||| | || || | || || Sbjct 6535 AATATCTACTGGAGGAGCAGCGATGAAGGCGATAATAAATACGGAAGTTGCGGTCAATAA 6594 Query 8802 GCAAGGAATCATTAGAACTCCAAACCAACCGACATAAAGTCTGTTGTTTGTACTTGTAAC 8861 | ||| ||||| | ||| |||||||| |||| ||||| | || | || || || | Sbjct 6595 GGTAGGGATCATCAAAACACCAAACCATCCGATGTAAAGACGATTTTCGGTGCTAGTTAT 6654 Query 8862 CCACTCGCAAAA 8873 ||| | ||| || Sbjct 6655 CCAGTTGCAGAA 6666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 615755524778760