Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eragrostis_20tef_20[genbank_20GCA_5F000970635.1_202015-04-08] 13,883 sequences; 607,317,615 total letters Query= NC_020867.1 Length=44892 Score E Sequences producing significant alignments: (Bits) Value seq6788 132 1e-26 >seq6788 Length=15930 Score = 132 bits (146), Expect = 1e-26 Identities = 152/202 (75%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 42280 TGGGATCAGTTTTGTAACTGGGTGACTTCGACTAACAACCGTCTTTATGTTGGGTGGTTT 42339 |||| || || || |||||| | ||| || | || |||||||| | || |||||| Sbjct 6675 TGGGGTCGCTTCTGCAACTGGATAACTAGCACCGAAAATCGTCTTTACATCGGATGGTTT 6616 Query 42340 GGTGTGCTGATGATTCCCTGTCTGCTCG-CTGCTACCACCTGTTTTATTGTCGCTTTCAT 42398 ||||| |||||| ||||| || | | | || || || |||||| |||| ||||| Sbjct 6615 GGTGTTTTGATGA-TCCCTACCTTATTGACCGCAACTTCCGTATTTATTATCGCCTTCAT 6557 Query 42399 TGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTCTGTA 42458 ||||| ||||| ||||| |||||||| |||||||| ||||| ||||| ||| | || || Sbjct 6556 CGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTA 6497 Query 42459 TGGCAACAACATCATCTCTGGT 42480 ||| ||||| || ||||||||| Sbjct 6496 TGGAAACAATATTATCTCTGGT 6475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143509137092884