Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eragrostis_20tef_20[genbank_20GCA_5F000970635.1_202015-04-08] 13,883 sequences; 607,317,615 total letters Query= NC_020873.1 Length=158621 Score E Sequences producing significant alignments: (Bits) Value seq10635 84.2 2e-11 >seq10635 Length=1693 Score = 84.2 bits (92), Expect = 2e-11 Identities = 249/381 (65%), Gaps = 5/381 (1%) Strand=Plus/Plus Query 91366 CCTTAGCAAAACCACCGAATC--TACCTTTAACAAGTTTAGTTAGGAATAGATGTCTATT 91423 |||| ||| | |||||||||| ||| |||| ||| | || ||||| || | || Sbjct 984 CCTT-GCATATCCACCGAATCGGTAC--TTAATGTTTTTTGATAAGAATAAGTGACGGTT 1040 Query 91424 GTCGATTAATAACTGACCTAGTTCAGAAACCTTGATGTAGTCCTGTGGTCGTGTGAACAT 91483 |||||||| | || || ||| || |||||||||||| |||| || || || | Sbjct 1041 ATCGATTAAGATTTGTCCGAGTGGAGTAACCTTGATGTAATCCTCCGGACGAACAAATAG 1100 Query 91484 TAACTCAATACTGTTTGGTGCACAGGACATCGCATTCTTAACGAACTTACTCAAATGGTC 91543 | ||| || | || ||| | | ||| |||| |||| ||||| ||| ||| Sbjct 1101 GATCTCGATGTTATTAGGTACGCTTTGCATAGCATCTCTAACAAACTTGTTCACATGAAT 1160 Query 91544 AATAACCACGTCCACGCTATCTTTCGTGTTTTTATAGTTCTTTCCTCCGAAGTTATCATA 91603 || || || || ||| ||||||||| | |||| || || || | | | || Sbjct 1161 GATGTTTACATCGACATCATCCTTCGTGTTTCTGAAGTTTTTACCACCTGATGTGTTGTA 1220 Query 91604 ACCTTGGAAAGATTCTAACCCCAAGTAGTATTCGATAGGTGGGATACACACACCTCTGAA 91663 | | || || || || || ||||| || || | |||||||| || ||||| | | Sbjct 1221 CTCATTAAATGAATCCAAACCTAAGTAATACTCAACTGGTGGGATGCATACACCCTTATA 1280 Query 91664 GTCATAATCAGATTCTTCTGTTTCTGTTCCGTTAGCACGAGAACCATAAGGCGCTAATAG 91723 ||| | ||| ||| ||||| |||||||| | ||| | ||| ||| | || || Sbjct 1281 GTCCTTATCTGATGTATCTGTATCTGTTCCATAGGCATAACTACCTGTAGGAGACAAGAG 1340 Query 91724 GATCGTTCTCTCTTCCATCCA 91744 ||| ||||| ||||| | ||| Sbjct 1341 GATTGTTCTATCTTCTAACCA 1361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507371136799080