Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eragrostis_20tef_20[genbank_20GCA_5F000970635.1_202015-04-08] 13,883 sequences; 607,317,615 total letters Query= NC_021539.2 Length=38275 Score E Sequences producing significant alignments: (Bits) Value seq9885 95.1 3e-15 >seq9885 Length=2412 Score = 95.1 bits (104), Expect = 3e-15 Identities = 97/126 (77%), Gaps = 3/126 (2%) Strand=Plus/Plus Query 16596 TTCCATGTCGCAGTAGATGATAAAGAAGCTATTCAAGTCGTTCCTTTTAATAGAAATGCG 16655 ||||| ||||||||||||||| |||| |||||||| |||| || || | ||||| Sbjct 1925 TTCCACTTCGCAGTAGATGATATCGAAGTTATTCAAGGTATTCCGGTTGATCGTAATGCT 1984 Query 16656 TGGCACTGTGGCGATGGTGGAAATGGATATGGAAACAGGAATACCGTCGGTGTAGAAATC 16715 ||||| ||||| |||||||| ||| | |||||| | || | ||||||| |||||| Sbjct 1985 TGGCATTGTGGTGATGGTGG---TGGTAACGGAAACCGAAAATCTATCGGTGTTGAAATC 2041 Query 16716 TGTTAC 16721 |||||| Sbjct 2042 TGTTAC 2047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122338227917702