Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eragrostis_20tef_20[genbank_20GCA_5F000970635.1_202015-04-08] 13,883 sequences; 607,317,615 total letters Query= NC_021865.1 Length=41294 Score E Sequences producing significant alignments: (Bits) Value seq9885 98.7 3e-16 >seq9885 Length=2412 Score = 98.7 bits (108), Expect = 3e-16 Identities = 171/251 (68%), Gaps = 11/251 (4%) Strand=Plus/Plus Query 14235 AGCAAATATGGCATCAAATGTCCGAATAAAATGGCACCGAAATATATTACGTTTCACAAT 14294 |||||||| ||||| ||||| || ||| | | | || ||||| | || || Sbjct 1810 AGCAAATACCCAATCAAGTGTCCTTATTCTATGAAAGCAGAGTACATTACAGTGCATAAC 1869 Query 14295 ACCTATAATGATGCCCCAGCAGAAAATGAGATTCGCTATATGATCGGGAACAATAACGAG 14354 || ||||||||||| || || | || ||| | || |||||||| || Sbjct 1870 ACTTATAATGATGCGCCTGCTAAGAACGAGGTAAATTACATGATCGGAAA---------- 1919 Query 14355 GTTTCGTTCCACGTTGCTGTGGACGATATGGAAGCTGTTCAGGGCATTCCTTTTGATCGA 14414 |||| |||||| | || || || ||||| |||| | |||| || ||||| ||||||| Sbjct 1920 -TTTCATTCCACTTCGCAGTAGATGATATCGAAGTTATTCAAGGTATTCCGGTTGATCGT 1978 Query 14415 AATGCCTGGCATTGCGGAGACGGGAACGGAACAGGAAACCGTCAGTCCATCGGCGTAGAG 14474 ||||| |||||||| || || || || | |||||||| | || ||||| || || Sbjct 1979 AATGCTTGGCATTGTGGTGATGGTGGTGGTAACGGAAACCGAAAATCTATCGGTGTTGAA 2038 Query 14475 ATTTGTTACTC 14485 || |||||||| Sbjct 2039 ATCTGTTACTC 2049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 131997435232176