Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eragrostis_20tef_20[genbank_20GCA_5F000970635.1_202015-04-08] 13,883 sequences; 607,317,615 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq2233 87.8 3e-12 >seq2233 Length=91068 Score = 87.8 bits (96), Expect = 3e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 146127 AAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAACAATTAGATGAT 146186 || ||||||||||| || || || ||||| || |||||||| ||||| ||||| || ||| Sbjct 79713 AAGGAAGGCATTCCTCCAGACCAGCAAAGGCTGATTTTTGCTGGTAAGCAATTGGAAGAT 79772 Query 146187 AATAGAACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCATTTAGT 146239 || || ||| | ||||| || || || ||||| ||||| | |||||||| Sbjct 79773 GGGAGGACATTAGCTGATTACAACATTCAGAAAGAGTCGACACTTCATTTAGT 79825 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786029970648360