Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eragrostis_20tef_20[genbank_20GCA_5F000970635.1_202015-04-08] 13,883 sequences; 607,317,615 total letters Query= NC_024216.1 Length=160541 Score E Sequences producing significant alignments: (Bits) Value seq9886 87.8 2e-12 >seq9886 Length=2408 Score = 87.8 bits (96), Expect = 2e-12 Identities = 85/109 (78%), Gaps = 4/109 (4%) Strand=Plus/Plus Query 103622 GATTGGGCGCTTTAAACTCCGTGAATTCAGAGGAAGCCTAAGTCGTAAGA----TATGGT 103677 ||||| | | ||||| | |||||||||| ||||||||| || || || |||||| Sbjct 681 GATTGCGTTCGTTAAATTGGGTGAATTCAGGGGAAGCCTACGTGCTATGAAGCATATGGT 740 Query 103678 AATTCTGAGCCAAGCTTAACAGGGATGTTAAGAAGGTGCAACGACTAAT 103726 ||| ||||||| |||| | |||||| | ||||||||||||||||||| Sbjct 741 AATCCTGAGCCGAGCTGCATAGGGATATGCAGAAGGTGCAACGACTAAT 789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 513514070584680