Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eragrostis_20tef_20[genbank_20GCA_5F000970635.1_202015-04-08] 13,883 sequences; 607,317,615 total letters Query= NC_024792.1 Length=160281 Score E Sequences producing significant alignments: (Bits) Value seq9888 82.4 8e-11 >seq9888 Length=2405 Score = 82.4 bits (90), Expect = 8e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 65203 TCTGTAGGGAACACATAGTAGTTATAGTGACCTACAAAACTCTTCTTAGCGGTAGACTTG 65262 ||| |||| | ||| |||| ||| | || || |||| | ||||| || || | Sbjct 1974 TCTTTAGGCATTACAAAGTAATTAAAATGTCCGCAAAAAGTTTTCTTTGCTTTACTTCTA 2033 Query 65263 AAGTCTGCGTAGGACACCTTAAGTTCAAAGCATCTCCATATACCTTTAGTATCGTAGGTC 65322 || || || || || |||| |||| |||||| ||| ||||| ||||| ||||| ||| Sbjct 2034 AAATCAGCAAGTGAAACTTTAATTTCATAGCATCGCCAAATACCCTTAGTGTCGTAAGTC 2093 Query 65323 ATATAATCGACTCGTTCTTTGCC 65345 ||||||||||||||||| || || Sbjct 2094 ATATAATCGACTCGTTCATTTCC 2116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 512682214967880