Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eragrostis_20tef_20[genbank_20GCA_5F000970635.1_202015-04-08] 13,883 sequences; 607,317,615 total letters Query= NC_025416.1 Length=141907 Score E Sequences producing significant alignments: (Bits) Value seq9973 104 2e-17 >seq9973 Length=2273 Score = 104 bits (114), Expect = 2e-17 Identities = 170/243 (70%), Gaps = 4/243 (2%) Strand=Plus/Minus Query 134471 GAGACCCTGTTAAGATTATTTGTGGTGACCCTGACGCAGATACTGAGTATGAACGTAAAG 134530 ||||||||||| ||| || |||| |||| || ||| | || || ||||||||||| Sbjct 1008 GAGACCCTGTTCTTATTCTTACTGGTAACCCAGAAGCAAAAACAGAACTTGAACGTAAAG 949 Query 134531 GTGCTGTAGAGGTACTTTGGGATACTTTTGGAGGTACTGAAACTGAAAAAGGATATAAAT 134590 | | |||| | ||||||| ||||| || || ||||| || || |||||| Sbjct 948 GACTAATTGAGGCTTTATGGGATATCTTTGGTGGAACAATTACTGAGAAGGGTTATAAAC 889 Query 134591 TACTAGATGAACATGTAGGATTAATTTATGGAGACTCTATTAACTATGAGCGTGCACAAC 134650 || ||||| ||| | || ||| ||||| |||||||||| |||||||||| || Sbjct 888 TATTAGATACTCATATTGGTGCAATCTATGGTGACTCTATTACTCTTGAGCGTGCAAAAG 829 Query 134651 AAAT--TTGTGAAGGATTAAAAGAAAAAGGTTTTGCAAGTATTAACGTTGTATTAGGTGT 134708 || ||| |||| ||| |||||||||| ||||| | |||||||| || || || Sbjct 828 CTATTGTTGAGAAG--TTAGAAGAAAAAGGCTTTGCTTCAACAAACGTTGTTTTCGGCGT 771 Query 134709 AGG 134711 || Sbjct 770 GGG 768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 453895618417560