Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eragrostis_20tef_20[genbank_20GCA_5F000970635.1_202015-04-08] 13,883 sequences; 607,317,615 total letters Query= NC_028659.1 Length=142987 Score E Sequences producing significant alignments: (Bits) Value seq9973 87.8 2e-12 >seq9973 Length=2273 Score = 87.8 bits (96), Expect = 2e-12 Identities = 108/145 (74%), Gaps = 2/145 (1%) Strand=Plus/Plus Query 69326 GATGCAAAGCCTTTATCTCTCAGACGT-TCAAAGATGTCTTTTGCACGCGCGACAGTGAT 69384 || ||||||||||| ||| || || | |||| || ||||||||||| | | ||| || Sbjct 792 GAAGCAAAGCCTTTTTCT-TCTAACTTCTCAACAATAGCTTTTGCACGCTCAAGAGTAAT 850 Query 69385 AGAATCACCGTAGATCAGACCAATATGACTATCAAGAACCTTATAGCCCTTGGAATTAAC 69444 ||| ||||| ||||| |||||||||| |||| | | ||||| ||||| | ||| Sbjct 851 AGAGTCACCATAGATTGCACCAATATGAGTATCTAATAGTTTATAACCCTTCTCAGTAAT 910 Query 69445 TTCACCACCGAAAATATCCCATAAA 69469 | ||||| || |||||||||||| Sbjct 911 TGTTCCACCAAAGATATCCCATAAA 935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 457351018671960