Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eragrostis_20tef_20[genbank_20GCA_5F000970635.1_202015-04-08] 13,883 sequences; 607,317,615 total letters Query= NC_028837.1 Length=41149 Score E Sequences producing significant alignments: (Bits) Value seq9885 111 4e-20 >seq9885 Length=2412 Score = 111 bits (122), Expect = 4e-20 Identities = 175/253 (69%), Gaps = 11/253 (4%) Strand=Plus/Plus Query 14239 CAAGTAAATATGGAATTAAATGTCCGAATAAAATGGCACCGAAATATATTACGTTCCACA 14298 |||| ||||| ||| || ||||| || ||| | | | || ||||| | || | Sbjct 1808 CAAGCAAATACCCAATCAAGTGTCCTTATTCTATGAAAGCAGAGTACATTACAGTGCATA 1867 Query 14299 ATACGTATAACGATGCTCCCGCAGAAAATGAGGTTCGTTACATGATCGGGAACAATAACG 14358 | || ||||| ||||| || || | || ||||| |||||||||||| || Sbjct 1868 ACACTTATAATGATGCGCCTGCTAAGAACGAGGTAAATTACATGATCGGAAA-------- 1919 Query 14359 AGGTTTCGTTCCACGTTGCTGTGGATGATAAGGAAGCTGTTCAGGGCATTCCTTTTGATC 14418 |||| |||||| | || || ||||||| |||| | |||| || ||||| |||||| Sbjct 1920 ---TTTCATTCCACTTCGCAGTAGATGATATCGAAGTTATTCAAGGTATTCCGGTTGATC 1976 Query 14419 GAAATGCCTGGCATTGTGGAGACGGGAACGGGACAGGAAACCGTCAATCCATCGGCGTAG 14478 | ||||| ||||||||||| || || || | |||||||| |||| ||||| || | Sbjct 1977 GTAATGCTTGGCATTGTGGTGATGGTGGTGGTAACGGAAACCGAAAATCTATCGGTGTTG 2036 Query 14479 AGATTTGTTATTC 14491 | || ||||| || Sbjct 2037 AAATCTGTTACTC 2049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 131533511727506