Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eragrostis_20tef_20[genbank_20GCA_5F000970635.1_202015-04-08] 13,883 sequences; 607,317,615 total letters Query= NC_028851.1 Length=37995 Score E Sequences producing significant alignments: (Bits) Value seq9885 89.7 1e-13 >seq9885 Length=2412 Score = 89.7 bits (98), Expect = 1e-13 Identities = 151/221 (68%), Gaps = 11/221 (5%) Strand=Plus/Plus Query 14265 ATGACACCAAAATATATTACGTTTCACAACACGTCCAATGATGCCCCAGCAGAAAATGAG 14324 |||| | || | || ||||| | || ||||| | |||||||| || || | || ||| Sbjct 1840 ATGAAAGCAGAGTACATTACAGTGCATAACACTTATAATGATGCGCCTGCTAAGAACGAG 1899 Query 14325 ATTCGCTATATGATTGGAAACAACAATGAAGTCAGCTTCCACGTTGCTGTGGACGATAAA 14384 | || ||||| ||||| || |||||| | || || || |||| Sbjct 1900 GTAAATTACATGATCGGAAATTTCA-----------TTCCACTTCGCAGTAGATGATATC 1948 Query 14385 GAAGCTGTTCAGGGCATTCCTTTTGATCGAAATGCCTGGCATTGTGGAGACGGGAACGGG 14444 |||| | |||| || ||||| ||||||| ||||| ||||||||||| || || || Sbjct 1949 GAAGTTATTCAAGGTATTCCGGTTGATCGTAATGCTTGGCATTGTGGTGATGGTGGTGGT 2008 Query 14445 ACAGGAAACCGTCAGTCCATCGGCGTAGAAATTTGTTACTC 14485 | |||||||| | || ||||| || ||||| |||||||| Sbjct 2009 AACGGAAACCGAAAATCTATCGGTGTTGAAATCTGTTACTC 2049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 121442375632822