Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eragrostis_20tef_20[genbank_20GCA_5F000970635.1_202015-04-08] 13,883 sequences; 607,317,615 total letters Query= NC_028895.1 Length=116138 Score E Sequences producing significant alignments: (Bits) Value seq9973 91.5 1e-13 >seq9973 Length=2273 Score = 91.5 bits (100), Expect = 1e-13 Identities = 98/129 (76%), Gaps = 3/129 (2%) Strand=Plus/Plus Query 16497 CGCTCTAGAGTAATAGAGTCGCCATAGATTGCCCCAACGTGAGAATCTAGACGTTTCAAT 16556 ||||| |||||||||||||| ||||||||||| |||| |||| ||||| |||| | Sbjct 837 CGCTCAAGAGTAATAGAGTCACCATAGATTGCACCAATATGAGTATCTAATAGTTTATAA 896 Query 16557 CCGTTCTC---GATTGTACCACCAAAAGTATCCCACAAACACTCAATCAAGCCTTTGACT 16613 || ||||| ||||| |||||||| ||||||| ||| |||||| | ||||| | Sbjct 897 CCCTTCTCAGTAATTGTTCCACCAAAGATATCCCATAAAGCCTCAATTAGTCCTTTACGT 956 Query 16614 TCGTGTTCT 16622 || ||||| Sbjct 957 TCAAGTTCT 965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 371453939705737