Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eragrostis_20tef_20[genbank_20GCA_5F000970635.1_202015-04-08] 13,883 sequences; 607,317,615 total letters Query= NC_029009.1 Length=147589 Score E Sequences producing significant alignments: (Bits) Value seq9627 84.2 2e-11 >seq9627 Length=3127 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/197 (72%), Gaps = 9/197 (5%) Strand=Plus/Minus Query 50829 GGATATTCGAAACGTAAATGGTAATGGAAACGTCCCGGACGGTTAAGCATAAAGTCATTT 50888 ||||| || || || | |||||||||||| || || |||||| | | |||||| |||||| Sbjct 880 GGATAATCAAATCGGATATGGTAATGGAATCGACCAGGACGGCTTAACATAAACTCATTT 821 Query 50889 ACACGACTTAAGCT-ATTAACAGTAAGAGCGTAGATACGTTTACGTTGTGATAA--ACCA 50945 || | ||||| | || || |||| || ||||||||||| || ||| || |||| Sbjct 820 AC-CTTATTAAGATCGTTTACCGTAATCGCATAGATACGTTT--CTTCTGAGAAGTACCA 764 Query 50946 TCGAATAAGCTCAATAGTTTTTCTTGTGGTTC-ACGAC--CGTCACGGTCATTGAATACT 51002 || ||||| | || || ||||| ||| ||| | | | | ||| |||||| | Sbjct 763 TCAAATAACCCCAGTAAGTTTTCCTGTTTTTCTGCTTCTTCATTACGAGGATTGAACATC 704 Query 51003 TTTTCAAATTCATCGAA 51019 |||||||| ||||| || Sbjct 703 TTTTCAAACTCATCCAA 687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472074863089320