Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eragrostis_20tef_20[genbank_20GCA_5F000970635.1_202015-04-08] 13,883 sequences; 607,317,615 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq7324 84.2 2e-11 >seq7324 Length=11911 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 118546 TGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGAACACCCAGACCC 118605 ||||||||||||||||| | | | || || | || || ||||| || |||||| Sbjct 6912 TGAGCAATCATGTATGTGAGAAGAGAATACGATGCAATGTTGAATGGAACTCCAAGACCC 6853 Query 118606 ATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCAACATAAAACTG 118664 ||||| || || | || |||| |||||| || ||||||||||| ||||||||||||| Sbjct 6852 ATGTCAGCAGAGCGTTGATACATTTGGCAGGATAGCTCCCCGTTCTCAACATAAAACTG 6794 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 118546 TGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGAACACCCAGACCC 118605 ||||||||||||||||| | | | || || | || || ||||| || |||||| Sbjct 8854 TGAGCAATCATGTATGTGAGAAGAGAATACGATGCAATGTTGAATGGAACTCCAAGACCC 8795 Query 118606 ATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCAACATAAAACTG 118664 ||||| || || | || |||| |||||| || ||||||||||| ||||||||||||| Sbjct 8794 ATGTCAGCAGAGCGTTGATACATTTGGCAGGATAGCTCCCCGTTCTCAACATAAAACTG 8736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414406670914012