Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eragrostis_20tef_20[genbank_20GCA_5F000970635.1_202015-04-08] 13,883 sequences; 607,317,615 total letters Query= NC_031039.1 Length=251042 Score E Sequences producing significant alignments: (Bits) Value seq11880 104 4e-17 >seq11880 Length=1288 Score = 104 bits (114), Expect = 4e-17 Identities = 140/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 191390 TTCATAATTGCAAAGAATACATTGGCAAAATCTCTAGCTACAGCACTTTCATATGAAATA 191449 |||| ||||||||||||||| ||||| ||| | || | | ||| |||| ||| Sbjct 299 TTCAGCATTGCAAAGAATACACGAGCAAAGTCTTTTGCATCTTCTGATTCGTATGGAATG 358 Query 191450 CTATTTTTAGCAAGGAAACCATGTAAGTTCATTGCGCCTAAACCAACTGAATGGAATAGA 191509 || ||||||||||| ||||| | |||||||| || | ||| ||||| || ||| | Sbjct 359 AAGTTCTTAGCAAGGAATCCATGAAGGTTCATTGTTCCAAGACCTACTGAGTGTAATGTA 418 Query 191510 GCATTTGCTTTTCTTATAGATGGTGCATTTTTGATATCACTCTTATCTGTTACAGATGTT 191569 ||||| ||||| | | | || || |||| |||| | ||||||||| ||| |||| Sbjct 419 GCATTCGCTTTCTTAACACCAGGAGCGTTTTCGATACAAGACTTATCTGTAACATCTGTT 478 Query 191570 AAAATATCCATTGCA 191584 || || |||||| || Sbjct 479 AACATTTCCATTACA 493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 803067013569360