Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hordeum_20pubiflorum_20[genbank_20GCA_5F000582825.1_202013-08-30]
1,818,420 sequences; 1,425,274,558 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq750497 123 2e-23
seq184930 113 4e-20
seq22228 109 5e-19
seq752483 107 2e-18
seq1743593 105 5e-18
seq41905 105 5e-18
seq752332 104 2e-17
seq7669 104 2e-17
seq164858 102 7e-17
seq774391 100 2e-16
seq756917 100 2e-16
seq8128 98.7 8e-16
seq1757073 96.9 3e-15
seq774187 96.9 3e-15
seq1745301 95.1 1e-14
seq1033180 89.7 4e-13
seq76768 89.7 4e-13
seq627898 87.8 1e-12
seq5304 86.0 5e-12
>seq750497
Length=14261
Score = 123 bits (136), Expect = 2e-23
Identities = 166/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || || | || || || | || || || || || |||||||| ||
Sbjct 11289 ATACCACCACGGAGCCTGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCA 11348
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| || ||| ||| || || || || ||||| ||||||| ||||| ||||||||
Sbjct 11349 GCAAGGGTGCGACCATCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCCGGG 11408
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||||||||| ||||| |||||| || | | |||| |||||| | ||| ||
Sbjct 11409 GGAATGCCTTCCTTGTCCTGGATCTTTGCCTTGACATTGTCAATGGTGTCCGAGGACTCA 11468
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383
|| |||| ||| | || |||||||| || || || ||||| |||||||||
Sbjct 11469 ACTTCCAGGGTGATGGTCTTGCCGGTGAGTGTCTTCACAAAGATCTGCATG 11519
Score = 113 bits (124), Expect = 4e-20
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| || || || || |||||||| || || ||| || ||| ||||| || || |||
Sbjct 11550 GTGGACTCCTTCTGGATGTTGTAGTCAGCCAGAGTGCGCCCATCCTCAAGCTGCTTGCCA 11609
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
||| ||||||||||||| |||||||| || ||||| || ||||| ||||| ||
Sbjct 11610 GCGAAGATGAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 11669
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | || | |||||| | ||| ||||| || | ||| | || |||||||| || ||
Sbjct 11670 ACATTGTCGATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTC 11729
Query 114366 TTTACAAAAATCTGCAT 114382
|| ||||| ||||||||
Sbjct 11730 TTCACAAAGATCTGCAT 11746
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| ||||| || || |||||||| || || || || ||| ||||| || ||||||
Sbjct 10866 GTGGATTCCTTCTGGATGTTGTAGTCCGCCAAGGTGCGGCCATCCTCAAGCTGCTTACCA 10925
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
|| |||| || ||||| |||||||| || ||||| || ||||| |||||| ||
Sbjct 10926 GCAAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGAATCTTCGCCTTC 10985
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | |||| |||||| | || || || |||| ||| | || || ||||| || ||
Sbjct 10986 ACGTTGTCAATGGTGTCAGAAGACTCAACCTCCAGGGTGATGGTCTTCCCGGTGAGGGTC 11045
Query 114366 TTTACAAAAATCTGCAT 114382
|| ||||||||||||||
Sbjct 11046 TTAACAAAAATCTGCAT 11062
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || || | ||||| || | || || || || || |||||||||||
Sbjct 11061 ATACCACCACGGAGCCTGAGCACTAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCC 11120
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| || ||| ||| ||||| || || || || |||| || || || ||||| ||
Sbjct 11121 GCAAGGGTGCGACCATCCTCAAGCTGCTTGCCGGCAAAGATCAGGCGTTGCTGGTCTGGG 11180
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|||||||| || ||||| ||||| || | | |||| |||||| | || ||
Sbjct 11181 GGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTCAGAAGACTCA 11240
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| ||| | || || || || || || || ||||| ||||||||
Sbjct 11241 ACCTCCAGGGTGATTGTCTTCCCCGTGAGGGTCTTGACAAATATCTGCAT 11290
>seq184930
Length=1266
Score = 113 bits (124), Expect = 4e-20
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| || || || || |||||||| || || || || ||| ||||| || |||||
Sbjct 290 GTGGACTCCTTCTGGATGTTGTAGTCCGCCAGGGTGCGGCCATCCTCAAGCTGCTTACCG 231
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
||| |||| || ||||| |||||||| || ||||| || ||||| ||||| ||
Sbjct 230 GCGAAGATTAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 171
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | |||| |||||| | ||| ||||| |||| ||| | || ||||||||||| ||
Sbjct 170 ACGTTGTCAATGGTGTCCGAGGACTCGACCTCCAAGGTGATGGTCTTGCCGGTCAGTGTC 111
Query 114366 TTTACAAAAATCTGCAT 114382
|| || |||||||||||
Sbjct 110 TTGACGAAAATCTGCAT 94
>seq22228
Length=285
Score = 109 bits (120), Expect = 5e-19
Identities = 116/153 (76%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 114231 TCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCG 114290
||||| || || |||||| |||| ||||| || ||||||||||| ||||| || |||||
Sbjct 3 TCAAGCTGCTTGCCAGCGAAGATCAGACGTTGCTGGTCCGGAGGGATGCCCTCCTTGTCC 62
Query 114291 GCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTT 114350
||||| || | | |||| |||||| | ||| ||||| |||| ||| | ||
Sbjct 63 TGGATCTTGGCCTTGACGTTGTCAATGGTGTCCGAGGACTCGACCTCCAGGGTGATGGTC 122
Query 114351 TTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383
||||||||||| || || || ||||||||||||
Sbjct 123 TTGCCGGTCAGTGTCTTGACGAAAATCTGCATG 155
>seq752483
Length=2742
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
||||| || ||||| |||||||||||| || || || ||| || || || || |||
Sbjct 952 GTAGACTCCTTTTGGATGTTGTAATCGGCCAATGTCCGGCCATCCTCTAGCTGCTTGCCA 893
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
|| | ||||| | ||||||||||||||| ||||| || ||||| |||||| |||
Sbjct 892 GCAAATATGAGCCTCTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTGAATCTTGGCTTTA 833
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | |||| ||| || | || || || | ||| | || |||||||| || ||
Sbjct 832 ACATTGTCAATGGTATCCGAACCCTCAACCTCGAGGGTGATAGTCTTGCCGGTGAGGGTC 773
Query 114366 TTTACAAAAATCTGCAT 114382
|||||||| ||||||||
Sbjct 772 TTTACAAAGATCTGCAT 756
Score = 98.7 bits (108), Expect = 8e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| || || || |||||||||||||| || || || |||||| |||||||| |||
Sbjct 1180 GTGGACTCCTTCTGAATGTTGTAATCAGCCAAGGTGCGGCCATCTTCCAGTTGTTTCCCA 1121
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
|| |||| || | ||||||||| || || ||||| || ||||| |||||| ||
Sbjct 1120 GCAAAGATAAGCCTCTGTTGGTCTGGTGGGATGCCCTCCTTGTCCTGGATCTTTGCCTTG 1061
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | |||| |||||| | ||||| || | || | || || || || ||||||
Sbjct 1060 ACATTGTCAATGGTGTCAGAACTCTCGACCTCTAGAGTTATGGTCTTCCCAGTAAGAGTT 1001
Query 114366 TTTACAAAAATCTGCAT 114382
|| ||||| ||||||||
Sbjct 1000 TTCACAAAGATCTGCAT 984
Score = 82.4 bits (90), Expect = 6e-11
Identities = 158/233 (68%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 114151 AAATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAAT 114210
||| ||| ||||| || | || || | ||| | || ||||||||||| ||||| ||||
Sbjct 1671 AAAGACCACCACGGAGGCGCAGGACAAGATGAAGAGTGGATTCTTTTTGGATGTTATAAT 1612
Query 114211 CGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCG 114270
| || ||||| ||| || || || || || || |||| || | ||| || || |
Sbjct 1611 CTGCCAAGGTACGCCCATCCTCCAGCTGCTTCCCTGCAAAGATAAGCCTCTGCTGATCTG 1552
Query 114271 GAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATT 114330
||||||| || || ||||| ||||| || | | || | |||||||| | |
Sbjct 1551 GAGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATTATCGATGGTGTCGGAGCTCT 1492
Query 114331 CGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383
| || || | || | || || || || | || || |||||||||||||||
Sbjct 1491 CCACCTCAAGAGTAATGGTCTTTCCAGTTAATGTCTTGACAAAAATCTGCATG 1439
>seq1743593
Length=9171
Score = 105 bits (116), Expect = 5e-18
Identities = 142/198 (72%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
||||| || || |||||||||||||| || ||| ||| ||| ||||| || || |||
Sbjct 1346 GTAGACTCCTTCTGAATGTTGTAATCCGCCAGAGTGCGACCATCCTCAAGCTGCTTGCCA 1405
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
|| |||| | | ||| |||||||| || ||||| || ||||| ||||| ||
Sbjct 1406 GCAAAGATCAACCTCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTC 1465
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | || | |||||| | ||||| || |||| ||| | || ||||| |||| ||
Sbjct 1466 ACGTTGTCGATGGTGTCTGAAGATTCCACCTCCAGGGTGATGGTCTTGCCAGTCAAGGTC 1525
Query 114366 TTTACAAAAATCTGCATG 114383
|| ||||| |||||||||
Sbjct 1526 TTGACAAAGATCTGCATG 1543
Score = 98.7 bits (108), Expect = 8e-16
Identities = 167/241 (69%), Gaps = 1/241 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| || ||||| || | | ||| || || | || || ||||| || ||||| |||||
Sbjct 1541 ATGCCACCACGGAGACGGAGAACCAAGTGGAGGGTGGACTCTTTCTGGATGTTATAATCA 1600
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| ||| || ||| ||||| || || || || ||||||| ||||||||||||||
Sbjct 1601 GCAAGAGTGCGCCCATCCTCAAGCTGCTTGCCGGCAAAGATGAGTCGCTGTTGGTCCGGC 1660
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || || || || || |||||| || | | |||| ||||| | || |||
Sbjct 1661 GGGATACCCTCCTTATCCTGGATCTTTGCCTTGACATTGTCAATTGTGTCAGAAGACTCG 1720
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT-GGCTTAATT 114391
|| || | || | || |||||||| || || || ||||| |||||||| || |||||
Sbjct 1721 ACCTCAAGTGTGATGGTCTTGCCGGTGAGCGTCTTCACAAAGATCTGCATCTGCATAATT 1780
Query 114392 A 114392
|
Sbjct 1781 A 1781
>seq41905
Length=7320
Score = 105 bits (116), Expect = 5e-18
Identities = 142/198 (72%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|||||||| || || |||||||| || || || || ||| || || || || |||
Sbjct 3225 GTAGATTCCTTCTGGATGTTGTAGTCTGCCAGGGTGCGGCCATCCTCCAGCTGCTTGCCA 3284
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
|| ||||||| ||||| ||||||||||| ||||| || ||||| |||||| ||
Sbjct 3285 GCAAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTTGCCTTC 3344
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | || | |||||| | || || || |||| || | || |||||||| || ||
Sbjct 3345 ACGTTGTCGATGGTGTCAGATGACTCCACCTCCAAAGTGATTGTCTTGCCGGTGAGGGTC 3404
Query 114366 TTTACAAAAATCTGCATG 114383
|| ||||| |||||||||
Sbjct 3405 TTCACAAATATCTGCATG 3422
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| || ||||| || || | || | || | || || || || || |||||||| ||
Sbjct 3420 ATGCCACCACGGAGCCTGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCA 3479
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || || ||| || || || || |||||| ||||||||||||| |||||||||
Sbjct 3480 GCCAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGA 3539
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || || || ||||| ||||| || | | || | |||||| | ||| ||
Sbjct 3540 GGGATTCCCTCCTTGTCCTGGATCTTAGCCTTGACATTGTCGATGGTGTCCGAGGACTCT 3599
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | ||| | || |||||||| || || || ||||| ||||||||
Sbjct 3600 ACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 3649
>seq752332
Length=10290
Score = 104 bits (114), Expect = 2e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| || || || || |||||||| || | ||||| ||| || || || || |||
Sbjct 5317 GTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTACGGCCATCCTCCAGCTGCTTTCCA 5376
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
|| ||||||||||||| ||||||||||||||||| || ||||| ||||| ||
Sbjct 5377 GCAAAGATGAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTG 5436
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | |||| |||||| | || || || || | ||| | || ||||| ||||| ||
Sbjct 5437 ACATTGTCAATGGTGTCAGACGACTCCACCTCAAGGGTGATGGTCTTGCCCGTCAGTGTC 5496
Query 114366 TTTACAAAAATCTGCAT 114382
|| ||||| ||||||||
Sbjct 5497 TTCACAAAGATCTGCAT 5513
Score = 91.5 bits (100), Expect = 1e-13
Identities = 139/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| || || || || |||||||| || | || ||| ||| || || || || ||
Sbjct 4405 GTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGACCATCCTCCAGCTGCTTGCCG 4464
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
||| ||||||||||||| |||||||| |||||||| || ||||| ||||| ||
Sbjct 4465 GCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTG 4524
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | || | |||||| | | || || || | ||| | || |||||||| || ||
Sbjct 4525 ACATTGTCGATGGTGTCAGAGCTCTCCACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTC 4584
Query 114366 TTTACAAAAATCTGCATG 114383
||||| || |||||||||
Sbjct 4585 TTTACGAAGATCTGCATG 4602
>seq7669
Length=6130
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| || ||||| || | | || | ||| | || || || || || |||||||| ||
Sbjct 6017 ATGCCACCACGAAGGCGGAGCACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCA 5958
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || || ||| ||||| || || ||||| ||||||| ||||| |||||||||
Sbjct 5957 GCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCCGGA 5898
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| ||||| || ||||| ||||| || | | |||| |||||| | ||| ||
Sbjct 5897 GGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCAATGGTGTCCGAGGACTCC 5838
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | ||| | || |||||||| || || || || |||||||||||
Sbjct 5837 ACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTAACGAAAATCTGCAT 5788
>seq164858
Length=2471
Score = 102 bits (112), Expect = 7e-17
Identities = 143/201 (71%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
||||| || || || |||||||| || || || || ||| ||||| || || ||
Sbjct 1931 GTAGACTCCTTCTGGATGTTGTAGTCTGCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCG 1990
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
||| |||| || ||||| |||||||| || ||||| || ||||| ||||| ||
Sbjct 1991 GCGAAGATAAGTCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTC 2050
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | || | |||||| | ||| || || |||| ||| | || |||||||| || ||
Sbjct 2051 ACATTGTCGATGGTGTCCGAGGACTCCACCTCCAAGGTGATGGTCTTGCCGGTGAGGGTC 2110
Query 114366 TTTACAAAAATCTGCATGGCT 114386
|| || |||||||||||| ||
Sbjct 2111 TTGACGAAAATCTGCATGCCT 2131
Score = 84.2 bits (92), Expect = 2e-11
Identities = 159/234 (68%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| || ||||| || || | || | || | || || || || || |||||||| ||
Sbjct 2126 ATGCCTCCACGCAGCCTGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCA 2185
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || || ||| || || || || || || ||||||| ||||| |||||||||
Sbjct 2186 GCCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGA 2245
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || || || ||||| ||||| || | | || | ||||| | ||| ||
Sbjct 2246 GGGATTCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCTGAGGACTCC 2305
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 114386
|| || | ||| | || ||||| ||||| || || || |||||||||||| ||
Sbjct 2306 ACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTGACGAAAATCTGCATGCCT 2359
>seq774391
Length=5162
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| || ||||| || || | || | || | || || || || || |||||||| ||
Sbjct 5043 ATGCCACCACGGAGCCTGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCA 4984
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || || ||| || ||||| || ||||| ||||||||||||| |||||||||
Sbjct 4983 GCCAAGGTGCGGCCATCCTCCAGTTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGA 4924
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| ||||| || || || ||||| || | | |||| ||||| | || ||
Sbjct 4923 GGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACGTTGTCAATCGTGTCAGAAGACTCA 4864
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | ||| | || |||||||| ||||| || ||||| ||||||||
Sbjct 4863 ACCTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTCACAAAGATCTGCAT 4814
>seq756917
Length=3581
Score = 100 bits (110), Expect = 2e-16
Identities = 141/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
||||| || || || |||||||| || || ||| || ||| ||||| || || ||
Sbjct 290 GTAGACTCCTTCTGGATGTTGTAGTCTGCCAGAGTGCGGCCATCCTCAAGCTGCTTGCCG 231
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
|| ||||||| ||||| |||||||| || ||||| || ||||| ||||| ||
Sbjct 230 GCAAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTC 171
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | || | |||||| | ||| || || |||| || | || |||||||||| ||
Sbjct 170 ACGTTGTCGATGGTGTCTGAGGACTCCACCTCCAGCGTGATGGTCTTGCCGGTCAAGGTC 111
Query 114366 TTTACAAAAATCTGCATG 114383
|| || ||||||||||||
Sbjct 110 TTGACGAAAATCTGCATG 93
>seq8128
Length=3827
Score = 98.7 bits (108), Expect = 8e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
||||| || || |||||||||||||| || ||| ||| || ||||| || || ||
Sbjct 3488 GTAGACTCCTTCTGAATGTTGTAATCCGCCAGAGTGCGACCGTCCTCAAGCTGCTTGCCC 3429
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
|| |||| | | ||| ||||||||||| ||||| || ||||| ||||| ||
Sbjct 3428 GCAAAGATCAACCTCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTC 3369
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | |||| ||| || | || ||||| |||| || | || |||||||| || |||
Sbjct 3368 ACATTGTCAATGGTATCCGAAGACTCGACCTCCAGAGTAATGGTCTTGCCGGTGAGGGTT 3309
Query 114366 TTTACAAAAATCTGCAT 114382
|| || || ||||||||
Sbjct 3308 TTCACGAAGATCTGCAT 3292
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| || || || || || ||||||||| | || || ||| || || || || ||
Sbjct 3260 GTGGACTCCTTCTGGATATTGTAATCGGCAAGTGTCCGGCCATCCTCGAGCTGCTTGCCC 3201
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
|| ||||||| ||||| |||||||| || ||||| || ||||| |||||| ||
Sbjct 3200 GCAAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTTGCCTTG 3141
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | |||| ||||||| ||| || || || | || | || || |||||||||||
Sbjct 3140 ACATTGTCAATTGTGTCGGAGGACTCAACCTCAAGTGTGATGGTCTTCCCGGTCAGAGTC 3081
Query 114366 TTTACAAAAATCTGCAT 114382
|| ||||| ||||||||
Sbjct 3080 TTCACAAAGATCTGCAT 3064
>seq1757073
Length=1799
Score = 96.9 bits (106), Expect = 3e-15
Identities = 115/156 (74%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 114227 ATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTT 114286
||| ||||| || || ||||| ||||||||||||| ||||||||| | ||||| || ||
Sbjct 1792 ATCCTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGAAGGATGCCCTCCTT 1733
Query 114287 GTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCAC 114346
||| ||||| || | | || | ||||| | ||| ||||| || | ||| |
Sbjct 1732 GTCCTGGATCTTAGCCTTGACGTTGTCGATAGTGTCTGAGGACTCGACCTCGAGGGTGAT 1673
Query 114347 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||||||| || || || ||||||||||||||
Sbjct 1672 AGTCTTGCCGGTGAGGGTCTTCACAAAAATCTGCAT 1637
>seq774187
Length=2036
Score = 96.9 bits (106), Expect = 3e-15
Identities = 115/156 (74%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 114227 ATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTT 114286
||| || || || || |||||| ||||||||||||| ||||||||||| ||||| || ||
Sbjct 2032 ATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCCTCCTT 1973
Query 114287 GTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCAC 114346
||| ||||| || | | || | ||| || | ||| ||||| || | ||| |
Sbjct 1972 GTCCTGGATCTTAGCCTTGACGTTGTCGATGGTATCCGAGGACTCGACCTCAAGGGTGAT 1913
Query 114347 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||||||| || || || ||||| ||||||||
Sbjct 1912 GGTCTTGCCGGTGAGGGTCTTCACAAATATCTGCAT 1877
>seq1745301
Length=2518
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | | || | || | || || || || || |||||||| ||
Sbjct 33 ATACCACCACGAAGGCGGAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCA 92
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| || ||| ||| ||||| || || ||||| ||||||||||||| |||||||||
Sbjct 93 GCAAGGGTGCGACCATCCTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGA 152
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|||||||| || ||||| ||||| || | | || | |||||||| | ||
Sbjct 153 GGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCA 212
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | ||| | || ||||| || || || || || || ||||||||
Sbjct 213 ACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 262
>seq1033180
Length=366
Score = 89.7 bits (98), Expect = 4e-13
Identities = 160/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATC- 114211
|| || ||||| || | | || || || | || || || || || |||||||| ||
Sbjct 40 ATGCCACCACGCAGGCGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCT 99
Query 114212 GCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGG 114271
||| | || || || ||||| || || || ||| ||||||| ||||| ||||||||
Sbjct 100 GCT-AGGGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCCGG 158
Query 114272 AGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTC 114331
|| ||||| || ||||| |||||| || | | || | |||| | ||| ||
Sbjct 159 GGGGATGCCCTCCTTGTCCTGAATCTTCGCCTTGACATTGTCGATCATGTCAGAGGACTC 218
Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | ||| | || |||||||| || || || ||||||||||||||
Sbjct 219 AACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAAATCTGCAT 269
>seq76768
Length=7679
Score = 89.7 bits (98), Expect = 4e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| || || || || |||||||| || || || || ||| || || || || |||
Sbjct 7499 GTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCATCCTCGAGCTGCTTGCCA 7440
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
|| |||| || ||||| ||||||||||| ||||| || ||||| ||||| ||
Sbjct 7439 GCAAAGATAAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTAGCCTTG 7380
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | || | |||||| | ||| ||||| || | ||| | || |||||||| || ||
Sbjct 7379 ACATTGTCGATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTC 7320
Query 114366 TTTACAAAAATCTGCAT 114382
|| || || ||||||||
Sbjct 7319 TTCACGAAGATCTGCAT 7303
>seq627898
Length=214
Score = 87.8 bits (96), Expect = 1e-12
Identities = 113/156 (72%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 114228 TCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTG 114287
|| ||||| || || || || ||||||| ||||| ||||||||||| ||||| || |||
Sbjct 9 TCCTCAAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTG 68
Query 114288 TCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACC 114347
|| ||||| || | | |||| ||||| | ||| || || |||| || |
Sbjct 69 TCCTGGATCTTGGCCTTGACATTGTCAATCGTGTCAGAGGACTCAACCTCCAGCGTGATG 128
Query 114348 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383
|| |||||||| || || || ||||| |||||||||
Sbjct 129 GTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCATG 164
>seq5304
Length=2956
Score = 86.0 bits (94), Expect = 5e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| || || || |||||||||||||| | ||| || ||| || || || || ||
Sbjct 705 GTGGACTCCTTCTGAATGTTGTAATCTGCAAGAGTGCGGCCATCCTCGAGCTGCTTGCCG 764
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
|| |||| | ||||| ||||||||| | ||||| || ||||| ||||| ||
Sbjct 765 GCAAAGATCAAGCGCTGCTGGTCCGGAAGGATGCCCTCCTTGTCCTGGATCTTCGCCTTG 824
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | |||| ||||||| ||| || || || | ||| | || ||||| || || ||
Sbjct 825 ACATTGTCAATTGTGTCGGAGGACTCAACCTCGAGGGTGATGGTCTTGCCTGTGAGGGTC 884
Query 114366 TTTACAAAAATCTGCAT 114382
|| ||||| ||||||||
Sbjct 885 TTCACAAAGATCTGCAT 901
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 410823384053040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |