Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20pubiflorum_20[genbank_20GCA_5F000582825.1_202013-08-30] 1,818,420 sequences; 1,425,274,558 total letters Query= NC_015279.1 Length=190789 Score E Sequences producing significant alignments: (Bits) Value seq45179 473 1e-128 seq57095 269 3e-67 seq155648 181 1e-40 seq213450 163 3e-35 seq856698 125 9e-24 seq352821 118 1e-21 seq79754 113 5e-20 seq769592 98.7 1e-15 seq159272 96.9 4e-15 seq788035 91.5 2e-13 seq36335 89.7 6e-13 seq720956 87.8 2e-12 seq703676 87.8 2e-12 seq214337 87.8 2e-12 seq761979 86.0 7e-12 seq738789 84.2 3e-11 seq702526 82.4 9e-11 seq657508 82.4 9e-11 seq57130 82.4 9e-11 >seq45179 Length=9647 Score = 473 bits (524), Expect = 1e-128 Identities = 551/741 (74%), Gaps = 2/741 (0%) Strand=Plus/Minus Query 181697 CAACTTGGGGGACTCTGGGCTTTTGTGGCGCTCCACGGAGCCTTCGCTCTTATCGGTTTT 181756 ||| | || || || ||| ||||||| || |||||||| || || || || || ||||| Sbjct 9628 CAATTAGGCGGTCTATGGACTTTTGTAGCTCTCCACGGGGCTTTTGCACTAATAGGTTTC 9569 Query 181757 ATGCTCAGGCAATTTGAACTTGCTCG-TCTAATCGGAATCCGACCCTACAATGCGATTGC 181815 ||| | | ||||||||||||||||| ||| || | | || || || ||||| || | Sbjct 9568 ATGTTACGCCAATTTGAACTTGCTCGGTCTGTTCA-ATTGCGGCCTTATAATGCAATCTC 9510 Query 181816 TTTTTCCGGTCCTATTGCTGTATTCGTCTCTGTATTTCTCATCTATCCTCTGGGACAATC 181875 || || ||||| |||||||| || || |||||||| || || ||||| ||||| ||||| Sbjct 9509 ATTCTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTTATTTATCCACTGGGGCAATC 9450 Query 181876 CAGTTGGTTCTTTGCGCCGAGTTTCGGTGTCGCGGCGATTTTCCGCTTCCTTCTCTTCCT 181935 |||||||||||||||||||||| || || || ||||| || || ||| | || ||| | Sbjct 9449 TGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGATATTTCGATTCATCCTTTTCTT 9390 Query 181936 CCAGGGCTTTCATAATTGGACGCTCAATCCCTTCCATATGATGGGTGTTGCTGGTATCCT 181995 ||| || ||||||||||||||| | || || || ||||||||||| ||||| || | | Sbjct 9389 CCAAGGATTTCATAATTGGACGTTGAACCCATTTCATATGATGGGAGTTGCCGGAGTATT 9330 Query 181996 GGGTGGCGCATTACTCTCTGCAATTCACGGTGTGACCGTGGAGAATACTCTGTATCAAGA 182055 || | || | || | || ||||| || | ||||| || || ||||| | | | || Sbjct 9329 AGGCGCGGCTCTGCTATGCGCTATTCATGGAGCAACCGTAGAAAACACTCTATTTGAGGA 9270 Query 182056 CGGTGACCAAGCAAATACTTTCAAAGCATTCGATTCAACTCAAGAAGAAGAAACCTATTC 182115 |||||| |||||||| ||| || || | ||||||||| |||||||| ||||| Sbjct 9269 CGGTGATGGTGCAAATACCTTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTC 9210 Query 182116 AATGGTTACAGCGAACCGCTTCTGGTCTCAGATCTTCGGTATTGCGTTTAGCAATAAGAG 182175 |||||| || || |||||||| ||||| || ||||| ||| |||| ||| |||||| | Sbjct 9209 AATGGTCACTGCTAACCGCTTTTGGTCCCAAATCTTTGGTGTTGCTTTTTCCAATAAACG 9150 Query 182176 GTGGTTGCATTTCTTTATGCTCTTTGTTCCTGTTATGGGTCTTTGGACAAGTTCCATCGG 182235 ||||| |||||||||||||| ||||| || || | ||| | |||| ||| | || || Sbjct 9149 TTGGTTACATTTCTTTATGCTATTTGTACCCGTCACCGGTTTATGGATGAGTGCTATTGG 9090 Query 182236 TATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTATCCCAAGAAATCAGAGC 182295 | |||| | ||||| ||| | ||||| ||||||||||| ||||| |||||| | || Sbjct 9089 CGTAGTTGGCTTGGCTCTGAACTTACGTGCCTATGACTTTGTTTCCCAGGAAATCCGTGC 9030 Query 182296 ATCAGAAGACCCAGAGTTCGAGACGTTCTACACAAAGAACATTCTCTTGAATGAAGGTCT 182355 | | ||||| || || || ||||| |||||||| || || ||||| || || || ||| | Sbjct 9029 AGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTTTTAAACGAGGGTAT 8970 Query 182356 GCGTGCATGGTTAGCACCAGTCGATCAACCACATGAGAACTTTGTGTTCCCTGAGGAAGT 182415 ||||| ||| | ||| | ||||| || ||||| || || | ||||||||||| || Sbjct 8969 TCGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGAAAATCTTATATTCCCTGAGGAGGT 8910 Query 182416 ATTACCCAGAGGTAACGCACT 182436 |||| | || ||||| || Sbjct 8909 TCTACCACGTGGAAACGCTCT 8889 >seq57095 Length=8353 Score = 269 bits (298), Expect = 3e-67 Identities = 373/517 (72%), Gaps = 4/517 (1%) Strand=Plus/Minus Query 179738 GTGGGATAACTTCTGCGAGTGGGTAACCTCTACCAATAACCGCCTCTATGTCGGTTGGTT 179797 ||||| | ||||||| | ||| |||| || | || || || || |||| ||||| Sbjct 515 GTGGGGTCGCTTCTGCAACTGGATAACTAGCACTGAAAATCGTCTTTACATCGGATGGTT 456 Query 179798 CGGCGTTCTGATGATTCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCA 179856 ||| ||| ||||||| || || | ||| | |||||| |||| || || ||||||||| Sbjct 455 CGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCA 397 Query 179857 TCGCTGCTCCCCCTGTGGACATCGATGGCATCCGTGAACCCGTCGCTGGTTCACTCATGT 179916 ||||||| || || || || || ||||| || ||||| || || ||||||| | | | Sbjct 396 TCGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTT 337 Query 179917 ATGGTAACAACATCATCTCTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGTCTTCACT 179976 |||| ||||| || ||||||||||| || ||||| |||| || || || | |||| Sbjct 336 ATGGAAACAATATTATCTCTGGTGCTATTATTCCTACTTCTGCGGCGATCGGATTGCACT 277 Query 179977 TCTATCCCATCTGGGAAGCCGCATCGCTTGACGAGTGGCTGTATAACGGTGGTCCTTTCC 180036 | || || || |||||||| ||||| |||| |||||| | || || |||||||||| Sbjct 276 TTTACCCAATTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGTGGTCCTTATG 217 Query 180037 AACTTGTCGTCTTCCACTTCCTGATTGGCATCTATGCCTACATGGGTCGTGAGTGGGAAC 180096 | || | || | |||||| | |||| | | || ||||||||||||||||||| Sbjct 216 AGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAAC 157 Query 180097 TTTCTTATCGCTTGGGTATGCGCCCCTGGATCTGC-GTAGCATATTCTGCTCCAGTCGCT 180155 || || || ||||||||||||| ||||| ||| || |||||||| ||||| || || Sbjct 156 TTAGTTTCCGTCTGGGTATGCGCCCTTGGAT-TGCTGTTGCATATTCAGCTCCTGTTGCA 98 Query 180156 GCAGCATCTGCTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCATTCTCTGACGCAATG 180215 || || ||||||| ||| | | || ||| | |||||||| || ||||| | ||| Sbjct 97 GCTGCTACTGCTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGCTTTTCTGATGGTATG 38 Query 180216 CCCCTCGGCATTTCTGGCACCTTCAACTACATGCTTG 180252 || | || || ||||| || ||||||| ||| ||| Sbjct 37 CCTTTAGGAATCTCTGGTACTTTCAACTTTATGATTG 1 >seq155648 Length=2022 Score = 181 bits (200), Expect = 1e-40 Identities = 225/308 (73%), Gaps = 0/308 (0%) Strand=Plus/Minus Query 181820 TCCGGTCCTATTGCTGTATTCGTCTCTGTATTTCTCATCTATCCTCTGGGACAATCCAGT 181879 || ||||| |||||| | || || | ||||| || || ||||| | ||| ||||| || Sbjct 2022 TCTGGTCCAATTGCTATTTTTGTTTACGTATTCCTTATTTATCCACCGGGGCAATCTGGT 1963 Query 181880 TGGTTCTTTGCGCCGAGTTTCGGTGTCGCGGCGATTTTCCGCTTCCTTCTCTTCCTCCAG 181939 |||||||||||||||||||| || || || |||| || || ||| | || ||| |||| Sbjct 1962 TGGTTCTTTGCGCCGAGTTTTGGCGTGGCAACGATATTGCGATTCATCCTTTTCTTCCAA 1903 Query 181940 GGCTTTCATAATTGGACGCTCAATCCCTTCCATATGATGGGTGTTGCTGGTATCCTGGGT 181999 || ||||||||||||||| | || || || ||||||||||| ||||| || | | || Sbjct 1902 GGATTTCATAATTGGACGTTGAACCCATTTCATATGATGGGAGTTGCCGGAGTATTAGGC 1843 Query 182000 GGCGCATTACTCTCTGCAATTCACGGTGTGACCGTGGAGAATACTCTGTATCAAGACGGT 182059 | | | | | || ||||| || | ||||| || || ||||| | | | |||||| Sbjct 1842 GCGACTCTGCCATGCGCTATTCATGGAGCAACCGTAGAAAACACTCTATTTGAGGACGGT 1783 Query 182060 GACCAAGCAAATACTTTCAAAGCATTCGATTCAACTCAAGAAGAAGAAACCTATTCAATG 182119 || |||||||| ||| || || | ||||||||| |||||||| ||||||||| Sbjct 1782 GATGGTGCAAATACCTTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATG 1723 Query 182120 GTTACAGC 182127 || || || Sbjct 1722 GTCACTGC 1715 >seq213450 Length=3525 Score = 163 bits (180), Expect = 3e-35 Identities = 221/307 (72%), Gaps = 7/307 (2%) Strand=Plus/Plus Query 180163 CTGCTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCATTCTCTGACGCAATGCCCCTCG 180222 ||||||| ||| | | || || | |||||||| || ||||| | ||||| | | Sbjct 3221 CTGCTGTTTTCTTGATTTAGCCCATTGGTCAAGGAAACTTTTCTGATGGTATGCCTTTAG 3280 Query 180223 GCATTTCTGGCACCTTCAACTACATGCTTGTTTTCCAAGCAGAGCACAACATCCTGATGC 180282 | || ||||| || ||||||| ||| |||| || || |||||||||||||| | |||| Sbjct 3281 GAATCTCTGGTACTTTCAACTTTATGATTGTATTTCAGTCAGAGCACAACATCTTTATGC 3340 Query 180283 ACCCCTTCCACATGCTGGGAGTAGCAGGTGTCTTCGGCGGTTCACTGTTCTCCGCAATGC 180342 | | || |||||| | || ||||| ||||| |||| |||||| || ||| || |||| Sbjct 3341 ATCTATTTCACATGTTAGGTGTAGCTGGTGTATTCGTCGGTTCCCTATTCAATGCTATGC 3400 Query 180343 ACGGTTCACTGGTTACCTCTTCACTGGTTCGTGAAACCACTGAAACTGAGTCCCAGAACT 180402 | ||||| ||| || | || | | ||||| ||||||| ||| ||| || Sbjct 3401 ATGGTTCCATGG-TAGTT------TGATCAGGGAAACTACTGAAAATGAATCCGCTAATG 3453 Query 180403 ACGGTTACAAGTTTGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCACATGGATACT 180462 | |||||||| ||||||||||| |||||||| || || || || ||||| ||||| || | Sbjct 3454 AGGGTTACAAATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATGGTTATT 3513 Query 180463 TCGGTCG 180469 | || || Sbjct 3514 TTGGCCG 3520 >seq856698 Length=257 Score = 125 bits (138), Expect = 9e-24 Identities = 117/149 (79%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 180591 AACGGTTTCAACTTCAACCAGTCCATCATTGATGGTCAAGGTCGTGTGCTCAACACTTGG 180650 || |||||||| |||||||| || | ||||| |||||||||| || | || |||||| Sbjct 3 AATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATACTTGG 62 Query 180651 GCAGACGTACTCAACCGCGCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAATGCTCAC 180710 || || | ||||||| ||| || ||||||||||| ||||| || |||||||||||| Sbjct 63 GCTGATATCATCAACCGTGCTAACCTTGGTATGGAAGTAATGCATGAACGTAATGCTCAC 122 Query 180711 AACTTCCCACTTGACCTGGCAGCTGCTGA 180739 |||||||| || ||| | || |||| ||| Sbjct 123 AACTTCCCTCTAGACTTAGCTGCTGTTGA 151 >seq352821 Length=202 Score = 118 bits (130), Expect = 1e-21 Identities = 131/175 (75%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 182241 TTGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTATCCCAAGAAATCAGAGCATCAG 182300 |||| | ||||| ||| | ||||| ||||||||||| ||||| |||||| | ||| | | Sbjct 28 TTGGCTTGGCTCTGAACTTACGTGCCTATGACTTTGTTTCCCAGGAAATCCGTGCAGCGG 87 Query 182301 AAGACCCAGAGTTCGAGACGTTCTACACAAAGAACATTCTCTTGAATGAAGGTCTGCGTG 182360 |||| || || || || || |||||||| || || ||||| || || || ||| | |||| Sbjct 88 AAGATCCTGAATTTGAAACTTTCTACACCAAAAATATTCTTTTAAACGAGGGTATTCGTG 147 Query 182361 CATGGTTAGCACCAGTCGATCAACCACATGAGAACTTTGTGTTCCCTGAGGAAGT 182415 | ||| | ||| | ||||| || ||||| || || | ||||||||||| || Sbjct 148 CGTGGATGGCAGCTCAGGATCAGCCTCATGAAAATCTTATATTCCCTGAGGAGGT 202 >seq79754 Length=5746 Score = 113 bits (124), Expect = 5e-20 Identities = 112/145 (77%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 182058 GTGACCAAGCAAATACTTTCAAAGCATTCGATTCAACTCAAGAAGAAGAAACCTATTCAA 182117 |||| | |||||||| ||| || || | ||||||||| |||||||| ||||||| Sbjct 4785 GTGATGATGCAAATACCTTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAA 4844 Query 182118 TGGTTACAGCGAACCGCTTCTGGTCTCAGATCTTCGGTATTGCGTTTAGCAATAAGAGGT 182177 |||| || || ||||| || ||||| || ||||| | | |||| ||| |||||| | | Sbjct 4845 TGGTCACTGCTAACCGTTTTTGGTCCCAAATCTTTGATGTTGCTTTTTCCAATAAATGTT 4904 Query 182178 GGTTGCATTTCTTTATGCTCTTTGT 182202 |||| |||||||||||||| ||||| Sbjct 4905 GGTTACATTTCTTTATGCTATTTGT 4929 >seq769592 Length=4310 Score = 98.7 bits (108), Expect = 1e-15 Identities = 80/97 (82%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 181821 CCGGTCCTATTGCTGTATTCGTCTCTGTATTTCTCATCTATCCTCTGGGACAATCCAGTT 181880 |||| || |||||||| || || ||| |||| | || ||||| ||||| ||||| |||| Sbjct 1360 CCGGCCCAATTGCTGTTTTTGTTTCTATATTCTTTATTTATCCACTGGGGCAATCTAGTT 1419 Query 181881 GGTTCTTTGCGCCGAGTTTCGGTGTCGCGGCGATTTT 181917 ||||||||||||||||||| || || |||||||| || Sbjct 1420 GGTTCTTTGCGCCGAGTTTTGGCGTAGCGGCGATATT 1456 >seq159272 Length=944 Score = 96.9 bits (106), Expect = 4e-15 Identities = 118/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 181820 TCCGGTCCTATTGCTGTATTCGTCTCTGTATTTCTCATCTATCCTCTGGGACAATCCAGT 181879 || || || |||| | || || | |||||| || || || || || || ||||| || Sbjct 303 TCTGGCCCAATTGTTCCTTTTGTTTTTGTATTCCTTATTTACCCACTTGGGCAATCTGGT 244 Query 181880 TGGTTCTTTGCGCCGAGTTTCGGTGTCGCGGCGATTTTCCGCTTCCTTCTCTTCCTCCAG 181939 |||||| |||| | ||||| || | || ||||| || || ||| | || ||| |||| Sbjct 243 TGGTTCATTGCATCTAGTTTTGGCATAGCAGCGATATTTCGATTCATCCTTTTCTTCCAA 184 Query 181940 GGCTTTCATAATTGGACGCTCAATCCCTTCCATATGATGGG 181980 || |||||||||||||| | || || || ||||||||||| Sbjct 183 GGATTTCATAATTGGACATTGAACCCATTTCATATGATGGG 143 >seq788035 Length=1366 Score = 91.5 bits (100), Expect = 2e-13 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 180405 GGTTACAAGTTTGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCACATGGATACTTC 180464 |||||||| ||||||||||| ||||| || || ||||| || ||||| |||| || | Sbjct 958 GGTTACAAATTTGGTCAAGAGGAAGAAACTTATAACATTGTGGCTGCTAATGGTTATATT 1017 Query 180465 GGTCGTCTGATCTTCCAGTATGCATCGTTCAACAACTCCCGTTCACTTCACTTCTTCCTG 180524 || | | |||||||| ||||| || |||||||| ||||| | ||||||||| || Sbjct 1018 GGCCAATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTTG 1077 Query 180525 GCAGC 180529 || || Sbjct 1078 GCTGC 1082 >seq36335 Length=20465 Score = 89.7 bits (98), Expect = 6e-13 Identities = 96/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 180180 TATCCTTTCGGTCAAGGTTCATTCTCTGACGCAATGCCCCTCGGCATTTCTGGCACCTTC 180239 || ||| | |||||||| || ||||| | |||| | || || || || || ||| Sbjct 3521 TACCCTATTGGTCAAGGAAGCTTTTCTGATGGTATGCTTTTAGGAATCTCCGGTACTTTC 3462 Query 180240 AACTACATGCTTGTTTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCACATGCTG 180299 |||| ||| |||| ||||| ||||||||||||||||| ||||| || ||||||||| | Sbjct 3461 AACTTTATGATTGTATTCCAGGCAGAGCACAACATCCTTATGCATCCATTCCACATGTTA 3402 Query 180300 GGAGTAG 180306 || |||| Sbjct 3401 GGTGTAG 3395 >seq720956 Length=214 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 141254 TTCCTCAGTAGCTCAGCGGCAGAGCCGACGACTGTTAATCGTCTGGTCGTAGGTTCAAAT 141313 |||||||||||||||| || ||||| | || ||||||| | |||||||||||||| ||| Sbjct 90 TTCCTCAGTAGCTCAGAGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTAGGTTCGAAT 149 Query 141314 CCTACCTGGGGAG 141326 ||||| ||||||| Sbjct 150 CCTACTTGGGGAG 162 >seq703676 Length=206 Score = 87.8 bits (96), Expect = 2e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 180308 AGGTGTCTTCGGCGGTTCACTGTTCTCCGCAATGCACGGTTCACTGGTTACCTCTTCACT 180367 |||||| ||||||| ||| || ||| || ||||| ||||| |||| |||||| | Sbjct 128 AGGTGTATTCGGCGATTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTT 69 Query 180368 GGTTCGTGAAACCACTGAAACTGAGTCCCAGAACTACGGTTACAAGTTTGGTCAAGAAGA 180427 | | | ||||| ||||||| ||| ||| || | |||||||| ||||||||||| || Sbjct 68 GATCAGGGAAACTACTGAAAATGAATCCGCTAATGAGGGTTACAAATTTGGTCAAGAGGA 9 Query 180428 AGAGAC 180433 |||||| Sbjct 8 AGAGAC 3 >seq214337 Length=7809 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 141254 TTCCTCAGTAGCTCAGCGGCAGAGCCGACGACTGTTAATCGTCTGGTCGTAGGTTCAAAT 141313 |||||||||||||||| || ||||| | || ||||||| | |||||||||||||| ||| Sbjct 7017 TTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTAGGTTCGAAT 7076 Query 141314 CCTACCTGGGGAG 141326 ||||| ||||||| Sbjct 7077 CCTACTTGGGGAG 7089 >seq761979 Length=10221 Score = 86.0 bits (94), Expect = 7e-12 Identities = 178/265 (67%), Gaps = 0/265 (0%) Strand=Plus/Minus Query 179877 ATCGATGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCT 179936 || |||| || | ||||| || || |||| | | |||| ||||| || |||||| Sbjct 475 ATTGATGATATTCATGAACATGTTTCTAGTTCTTTACTTTATGAAAACAATATTATCTCT 416 Query 179937 GGTGCAGTTGTTCCTTCTTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCC 179996 ||||| || ||||| |||| | | || | ||||| || || || || ||| Sbjct 415 GGTGCTATTATTCCTACTTCGACGGTGATCAAATTGCACTTTTACCCAATTTGAAAAGTT 356 Query 179997 GCATCGCTTGACGAGTGGCTGTATAACGGTGGTCCTTTCCAACTTGTCGTCTTCCACTTC 180056 |||||| |||| |||||| | || || |||||||||| | || | | || |||||| Sbjct 355 GCATCGGTTGATGAGTGGTTATACAATGGTGGTCCTTATGAGCTAATTTTTTTACACTTC 296 Query 180057 CTGATTGGCATCTATGCCTACATGGGTCGTGAGTGGGAACTTTCTTATCGCTTGGGTATG 180116 | |||| | | || |||||| |||||| ||||||| || || |||||||| Sbjct 295 TTACTTGGTGTAGCTTGTTATATGGGTTGTGAGTAGGAACTTAGTTTCCGTCTGGGTATG 236 Query 180117 CGCCCCTGGATCTGCGTAGCATATT 180141 | || || || || ||||||| Sbjct 235 CATCCTTGAATTGTTGTTGCATATT 211 >seq738789 Length=219 Score = 84.2 bits (92), Expect = 3e-11 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 141254 TTCCTCAGTAGCTCAGCGGCAGAGCCGACGACTGTTAATCGTCTGGTCGTAGGTTCAAAT 141313 |||||||||||||||| || ||||| | || ||||||| | |||||||||||||| ||| Sbjct 39 TTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTAGGTTCGAAT 98 Query 141314 CCTACCTGGGG 141324 ||||| ||||| Sbjct 99 CCTACTTGGGG 109 >seq702526 Length=229 Score = 82.4 bits (90), Expect = 9e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 141254 TTCCTCAGTAGCTCAGCGGCAGAGCCGACGACTGTTAATCGTCTGGTCGTAGGTTCAAAT 141313 |||||||||||||||| || ||||| | || ||||||| | || ||||||||||| ||| Sbjct 161 TTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTTGTCGTAGGTTCGAAT 102 Query 141314 CCTACCTGGGGAG 141326 ||||| ||||||| Sbjct 101 CCTACTTGGGGAG 89 >seq657508 Length=227 Score = 82.4 bits (90), Expect = 9e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 141254 TTCCTCAGTAGCTCAGCGGCAGAGCCGACGACTGTTAATCGTCTGGTCGTAGGTTCAAAT 141313 ||||||| |||||||| || ||||| | || ||||||| | |||||||||||||| ||| Sbjct 118 TTCCTCACTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTAGGTTCGAAT 59 Query 141314 CCTACCTGGGGAG 141326 ||||| ||||||| Sbjct 58 CCTACTTGGGGAG 46 >seq57130 Length=3464 Score = 82.4 bits (90), Expect = 9e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 141254 TTCCTCAGTAGCTCAGCGGCAGAGCCGACGACTGTTAATCGTCTGGTCGTAGGTTCAAAT 141313 |||||||||||||||| || ||||| | | ||||||| | |||||||||||||| ||| Sbjct 2247 TTCCTCAGTAGCTCAGTGGTAGAGCGGTTGGCTGTTAACTGACTGGTCGTAGGTTCGAAT 2188 Query 141314 CCTACCTGGGGAG 141326 ||||| ||||||| Sbjct 2187 CCTACTTGGGGAG 2175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596522328136800