Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20pubiflorum_20[genbank_20GCA_5F000582825.1_202013-08-30] 1,818,420 sequences; 1,425,274,558 total letters Query= NC_018841.1 Length=29574 Score E Sequences producing significant alignments: (Bits) Value seq1742705 289 5e-74 >seq1742705 Length=226 Score = 289 bits (320), Expect = 5e-74 Identities = 194/226 (86%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 8294 GGCGGCCCACCTGAATTGTTGGCAGCGCCCGTTTGAGTGGNNNNNNNNNNNNNNNNNNNN 8353 |||||||||||||||| ||||||||||||||||||||||| Sbjct 226 GGCGGCCCACCTGAATGGTTGGCAGCGCCCGTTTGAGTGGTGTGAGTGGGCTGTACTGGA 167 Query 8354 NNNNNNNNNTCATTACAGGTCTGCTAATAGTGAGGGGCAGCCGGAGCCTGTGGCGAGGCC 8413 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 166 CATGTTGGATCATTACAGGTCTGCTAATAGTGAGGGGCAGCCGGAGCCTGTGGCGAGGCC 107 Query 8414 TACGGATGAGCGTAGGGCCCGGTTTACCTCTGGGCAGGTGGACGATATTTTGGCGCGTGT 8473 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 106 TACGGATGAGCGTAGGGCCCGGTTTACGTCTGGGCAGGTGGACGATATTTTGGCGCGTGT 47 Query 8474 TCGTGCCGGTGGCGGGGTGTCTCGCGAGATTGATATTATGGGGTGA 8519 ||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 46 TCGTGCCGGTGGCGGGGTGTCTCGCGAGATTAATATTATGGGGTGA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 92474263581440