Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20pubiflorum_20[genbank_20GCA_5F000582825.1_202013-08-30] 1,818,420 sequences; 1,425,274,558 total letters Query= NC_019714.1 Length=39026 Score E Sequences producing significant alignments: (Bits) Value seq747945 143 6e-30 >seq747945 Length=243 Score = 143 bits (158), Expect = 6e-30 Identities = 151/199 (76%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 33664 TGCTTATCTCGGTTGGCGATTTGGTCGATCGCGGTACAGAGAACGTCGAATGCCTGGAAT 33723 |||| || |||||||| || | || || ||||| | || |||||||| |||||||| Sbjct 41 TGCTGATTTCGGTTGGAGACCTTGTTGACCGCGGCGCGGAAAACGTCGAGTGCCTGGAGC 100 Query 33724 TAATCACATTCCCCTGGTTCAGAGCTGTACGTGGAAACCATGAGCAAATGATGATTGATG 33783 | || || | || |||||| | ||||| || || ||||||||||| ||||||||||||| Sbjct 101 TGATTACTATGCCTTGGTTCCGGGCTGTGCGAGGTAACCATGAGCAGATGATGATTGATG 160 Query 33784 GCTTATCAGAGCGAGGAAACGTCAATCACTGGATGCTTAATGGCGGTGGCTGGTTCTTTA 33843 | |||| ||| |||||||| || |||||| || || ||||| | |||||||| | Sbjct 161 GGCTATCGGAGTATGGAAACGTTAACCACTGGCTGGAAAACGGCGGCGTGTGGTTCTTCA 220 Query 33844 ATCTCGATTACGACAAAGA 33862 ||| ||||| || ||||| Sbjct 221 GTCTTGATTATGAAAAAGA 239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122067530759520