Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20pubiflorum_20[genbank_20GCA_5F000582825.1_202013-08-30] 1,818,420 sequences; 1,425,274,558 total letters Query= NC_019723.1 Length=47090 Score E Sequences producing significant alignments: (Bits) Value seq747945 152 2e-32 >seq747945 Length=243 Score = 152 bits (168), Expect = 2e-32 Identities = 153/199 (77%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 41750 TGCTTATCTCGGTGGGCGATTTGGTTGATCGTGGTGCAGAGAACGTTGAATGCCTGGAAT 41809 |||| || ||||| || || | ||||| || || || || ||||| || |||||||| Sbjct 41 TGCTGATTTCGGTTGGAGACCTTGTTGACCGCGGCGCGGAAAACGTCGAGTGCCTGGAGC 100 Query 41810 TAATCACATTCCCCTGGTTCAGAGCTGTACGTGGAAACCATGAGCAAATGATGATTGATG 41869 | || || | || |||||| | ||||| || || ||||||||||| ||||||||||||| Sbjct 101 TGATTACTATGCCTTGGTTCCGGGCTGTGCGAGGTAACCATGAGCAGATGATGATTGATG 160 Query 41870 GCTTATCAGAGCGTGGAAACGTTAATCACTGGCTGCTTAATGGCGGTGGCTGGTTCTTTA 41929 | |||| ||| |||||||||||| ||||||||| || ||||| | |||||||| | Sbjct 161 GGCTATCGGAGTATGGAAACGTTAACCACTGGCTGGAAAACGGCGGCGTGTGGTTCTTCA 220 Query 41930 ATCTCGATTACGACAAAGA 41948 ||| ||||| || ||||| Sbjct 221 GTCTTGATTATGAAAAAGA 239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147315108682080