Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20pubiflorum_20[genbank_20GCA_5F000582825.1_202013-08-30] 1,818,420 sequences; 1,425,274,558 total letters Query= NC_020859.1 Length=175430 Score E Sequences producing significant alignments: (Bits) Value seq45179 417 9e-112 seq57095 273 2e-68 seq155648 141 1e-28 seq352821 122 1e-22 seq856698 116 4e-21 seq213450 113 5e-20 seq788035 100 3e-16 seq761979 93.3 5e-14 seq159272 91.5 2e-13 seq214337 89.7 6e-13 seq720956 87.8 2e-12 seq79754 87.8 2e-12 seq738789 84.2 2e-11 seq702526 84.2 2e-11 seq657508 84.2 2e-11 seq57130 84.2 2e-11 >seq45179 Length=9647 Score = 417 bits (462), Expect = 9e-112 Identities = 541/745 (73%), Gaps = 2/745 (0%) Strand=Plus/Minus Query 167287 CAACTTGGGGGACTCTGGGCTTTTGTGGCGCTCCACGGAGCCTTTGCTCTCATTGGTTTC 167346 ||| | || || || ||| ||||||| || |||||||| || ||||| || || |||||| Sbjct 9628 CAATTAGGCGGTCTATGGACTTTTGTAGCTCTCCACGGGGCTTTTGCACTAATAGGTTTC 9569 Query 167347 ATGCTTCGACAGTTTGAACTTGCTCGC-CTGATTGGTATCCGTCCCTACAATGCTATTGC 167405 ||| | || || |||||||||||||| ||| | | | || || || ||||| || | Sbjct 9568 ATGTTACGCCAATTTGAACTTGCTCGGTCTGTTCAAT-TGCGGCCTTATAATGCAATCTC 9510 Query 167406 TTTCTCTGGTCCTATTGCTGTCTTCGTTAGCGTTTTCCTTCTCTATCCCCTCGGTCAAAG 167465 ||||||||||| |||||||| || ||| || |||||| | ||||| || || ||| Sbjct 9509 ATTCTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTTATTTATCCACTGGGGCAATC 9450 Query 167466 CAGCTGGTTCTTTGCCCCGTCCTTCGGAGTCGCCGCCATCTTCCGATTCCTCCTCTTCCT 167525 | ||||||||||| ||| || || || || || || || |||||| |||| ||| | Sbjct 9449 TGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGATATTTCGATTCATCCTTTTCTT 9390 Query 167526 CCAAGGATTCCACAACTGGACACTGAATCCATTTCATATGATGGGTGTAGCAGGTATCCT 167585 ||||||||| || || ||||| |||| ||||||||||||||||| || || || | | Sbjct 9389 CCAAGGATTTCATAATTGGACGTTGAACCCATTTCATATGATGGGAGTTGCCGGAGTATT 9330 Query 167586 GGGTGGTGCATTGCTTTCTGCAATCCATGGTGTTACAGTAGAGAATACTTTGTATGAAGA 167645 || | || |||| | || || ||||| | || ||||| || ||| | | ||| || Sbjct 9329 AGGCGCGGCTCTGCTATGCGCTATTCATGGAGCAACCGTAGAAAACACTCTATTTGAGGA 9270 Query 167646 TGGTGAGCAAGCAAACACTTTTAAGGCATTCGATTCTACTCAGGAAGAAGAGACTTATTC 167705 ||||| ||||| || || || || | | ||||| | ||||| |||||||| Sbjct 9269 CGGTGATGGTGCAAATACCTTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTC 9210 Query 167706 AATGGTTACAGCAAACCGATTCTGGTCTCAGATCTTCGGCATTGCTTTCAGCAACAAACG 167765 |||||| || || ||||| || ||||| || ||||| || ||||||| ||| ||||| Sbjct 9209 AATGGTCACTGCTAACCGCTTTTGGTCCCAAATCTTTGGTGTTGCTTTTTCCAATAAACG 9150 Query 167766 CTGGCTTCATTTCTTTATGTTATTCGTTCCCGTTATGGGACTTTGGACATCATCGATTGG 167825 ||| | |||||||||||| |||| || ||||| | || | |||| | ||||| Sbjct 9149 TTGGTTACATTTCTTTATGCTATTTGTACCCGTCACCGGTTTATGGATGAGTGCTATTGG 9090 Query 167826 CATCATTGGTCTGGCTCTTAATCTTCGTGCTTACGATTTCGTTTCTCAAGAGATCAGAGC 167885 | | |||| ||||||| || | ||||| || || || ||||| || || ||| | || Sbjct 9089 CGTAGTTGGCTTGGCTCTGAACTTACGTGCCTATGACTTTGTTTCCCAGGAAATCCGTGC 9030 Query 167886 GGCGGAGGATCCAGAGTTTGAAACTTTCTATACTAAAAACATCCTTCTGAATGAAGGTCT 167945 ||||| ||||| || ||||| |||||||| || ||||| || ||| | || || ||| | Sbjct 9029 AGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTTTTAAACGAGGGTAT 8970 Query 167946 TCGAGCATGGTTAGCACCTATCGATCAACCTCATGAGAACTTTGTGTTCCCAGAGGAAGT 168005 ||| || ||| | ||| || ||||| |||||||| || || | ||||| ||||| || Sbjct 8969 TCGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGAAAATCTTATATTCCCTGAGGAGGT 8910 Query 168006 TCTCCCACGAGGCAACGCACTATAA 168030 ||| ||||| || ||||| || ||| Sbjct 8909 TCTACCACGTGGAAACGCTCTTTAA 8885 >seq57095 Length=8353 Score = 273 bits (302), Expect = 2e-68 Identities = 361/498 (72%), Gaps = 2/498 (0%) Strand=Plus/Minus Query 165768 CTTCTGCGAATGGGTTACCAGCACAAATAACCGTCTGTATGTCGGTTGGTTTGGTACGCT 165827 ||||||| | ||| | || ||||| | || ||||| || |||| ||||| ||| | Sbjct 506 CTTCTGCAACTGGATAACTAGCACTGAAAATCGTCTTTACATCGGATGGTTCGGTGTTTT 447 Query 165828 GATGATTCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCATCGCTGCTC 165886 |||||| || || | ||| | |||||| |||| || || |||||||||||||||| | Sbjct 446 GATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCC 388 Query 165887 CCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCTCTGATGTATGGTAACA 165946 | || || || || || || || ||||| || || |||||||| | | ||||| |||| Sbjct 387 CTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACA 328 Query 165947 ACATCATCTCTGGTGCAGTTGTTCCCTCTTCCAACGCAATTGGTCTACACTTCTATCCCA 166006 | || ||||||||||| || |||| |||| || || || | ||||| || || | Sbjct 327 ATATTATCTCTGGTGCTATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAA 268 Query 166007 TCTGGGAAGCCGCATCGCTTGACGAATGGCTCTATAACGGTGGTCCTTTCCAACTGGTTG 166066 | |||||||| ||||| |||| || ||| | || || |||||||||| | || ||| Sbjct 267 TTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGTGGTCCTTATGAGCTAATTG 208 Query 166067 TCTTCCACTTCCTGATTGGCATCTATGCCTACATGGGTCGTGAGTGGGAACTGTCTTACC 166126 | | |||||| | |||| | | || |||||||||||||||||||| || || Sbjct 207 TTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCC 148 Query 166127 GTCTAGGTATGCGTCCATGGATCTGTGTTGCTTACTCAGCACCAGTCGCTGCTGCGAGTG 166186 |||| |||||||| || ||||| |||||| || ||||| || || || ||||| | || Sbjct 147 GTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTG 88 Query 166187 CAGTATTCCTAGTATATCCTTTCGGTCAAGGTAGTTTCTCTGATGCAATGCCACTCGGAA 166246 | || ||| | | || ||| | |||||||| || || ||||||| ||||| | |||| Sbjct 87 CTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTTTAGGAA 28 Query 166247 TCTCAGGAACATTCAACT 166264 |||| || || ||||||| Sbjct 27 TCTCTGGTACTTTCAACT 10 >seq155648 Length=2022 Score = 141 bits (156), Expect = 1e-28 Identities = 216/308 (70%), Gaps = 0/308 (0%) Strand=Plus/Minus Query 167410 TCTGGTCCTATTGCTGTCTTCGTTAGCGTTTTCCTTCTCTATCCCCTCGGTCAAAGCAGC 167469 |||||||| |||||| | || ||| ||| |||||| | ||||| | || ||| | Sbjct 2022 TCTGGTCCAATTGCTATTTTTGTTTACGTATTCCTTATTTATCCACCGGGGCAATCTGGT 1963 Query 167470 TGGTTCTTTGCCCCGTCCTTCGGAGTCGCCGCCATCTTCCGATTCCTCCTCTTCCTCCAA 167529 ||||||||||| ||| || || || || | || || |||||| |||| ||| ||||| Sbjct 1962 TGGTTCTTTGCGCCGAGTTTTGGCGTGGCAACGATATTGCGATTCATCCTTTTCTTCCAA 1903 Query 167530 GGATTCCACAACTGGACACTGAATCCATTTCATATGATGGGTGTAGCAGGTATCCTGGGT 167589 ||||| || || ||||| |||| ||||||||||||||||| || || || | | || Sbjct 1902 GGATTTCATAATTGGACGTTGAACCCATTTCATATGATGGGAGTTGCCGGAGTATTAGGC 1843 Query 167590 GGTGCATTGCTTTCTGCAATCCATGGTGTTACAGTAGAGAATACTTTGTATGAAGATGGT 167649 | | ||| | || || ||||| | || ||||| || ||| | | ||| || ||| Sbjct 1842 GCGACTCTGCCATGCGCTATTCATGGAGCAACCGTAGAAAACACTCTATTTGAGGACGGT 1783 Query 167650 GAGCAAGCAAACACTTTTAAGGCATTCGATTCTACTCAGGAAGAAGAGACTTATTCAATG 167709 || ||||| || || || || | | ||||| | ||||| |||||||||||| Sbjct 1782 GATGGTGCAAATACCTTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATG 1723 Query 167710 GTTACAGC 167717 || || || Sbjct 1722 GTCACTGC 1715 >seq352821 Length=202 Score = 122 bits (134), Expect = 1e-22 Identities = 138/185 (75%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 167821 ATTGGCATCATTGGTCTGGCTCTTAATCTTCGTGCTTACGATTTCGTTTCTCAAGAGATC 167880 |||||| | |||| ||||||| || | ||||| || || || ||||| || || ||| Sbjct 18 ATTGGCTTAGTTGGCTTGGCTCTGAACTTACGTGCCTATGACTTTGTTTCCCAGGAAATC 77 Query 167881 AGAGCGGCGGAGGATCCAGAGTTTGAAACTTTCTATACTAAAAACATCCTTCTGAATGAA 167940 | || ||||| ||||| || |||||||||||||| || ||||| || ||| | || || Sbjct 78 CGTGCAGCGGAAGATCCTGAATTTGAAACTTTCTACACCAAAAATATTCTTTTAAACGAG 137 Query 167941 GGTCTTCGAGCATGGTTAGCACCTATCGATCAACCTCATGAGAACTTTGTGTTCCCAGAG 168000 ||| |||| || ||| | ||| || ||||| |||||||| || || | ||||| ||| Sbjct 138 GGTATTCGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGAAAATCTTATATTCCCTGAG 197 Query 168001 GAAGT 168005 || || Sbjct 198 GAGGT 202 >seq856698 Length=257 Score = 116 bits (128), Expect = 4e-21 Identities = 115/149 (77%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 166612 AACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGG 166671 || |||||||| |||||||| || | ||||| |||| ||||| || | || || ||| Sbjct 3 AATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATACTTGG 62 Query 166672 GCAGATGTTCTTAACCGCGCTGGTCTCGGTATGGAAGTTATGCATGAGCGTAACGCACAC 166731 || ||| | | ||||| ||| || ||||||||||| |||||||| ||||| || ||| Sbjct 63 GCTGATATCATCAACCGTGCTAACCTTGGTATGGAAGTAATGCATGAACGTAATGCTCAC 122 Query 166732 AACTTCCCCCTCGACCTCGCTGCTGCTGA 166760 |||||||| || ||| | ||||||| ||| Sbjct 123 AACTTCCCTCTAGACTTAGCTGCTGTTGA 151 >seq213450 Length=3525 Score = 113 bits (124), Expect = 5e-20 Identities = 195/284 (69%), Gaps = 7/284 (2%) Strand=Plus/Plus Query 166210 GGTCAAGGTAGTTTCTCTGATGCAATGCCACTCGGAATCTCAGGAACATTCAACTACATG 166269 |||||||| | || ||||||| ||||| | |||||||| || || ||||||| ||| Sbjct 3247 GGTCAAGGAAACTTTTCTGATGGTATGCCTTTAGGAATCTCTGGTACTTTCAACTTTATG 3306 Query 166270 TTGGTCTTCCAAGCTGAGCACAATATTCTCATGCATCCCTTCCATATGCTCGGCGTTGCT 166329 | || || || | |||||||| || | ||||||| || || ||| | || || ||| Sbjct 3307 ATTGTATTTCAGTCAGAGCACAACATCTTTATGCATCTATTTCACATGTTAGGTGTAGCT 3366 Query 166330 GGGGTATTTGGTGGCAGTTTGTTTAGTGCTATGCACGGAAGTTTGGTTACTTCTTCTCTC 166389 || ||||| | || | || | ||||||||| || |||| || || Sbjct 3367 GGTGTATTCGTCGGTTCCCTATTCAATGCTATGCATGGTTCCATGGTAGTTTGATC---- 3422 Query 166390 GTTAGAGAGACGACTGAAACCGAATCCCAAAACTACGGTTACAAGTTCGGACAAGAAGAA 166449 || || || ||||||| |||||| || | |||||||| || || ||||| ||| Sbjct 3423 ---AGGGAAACTACTGAAAATGAATCCGCTAATGAGGGTTACAAATTTGGTCAAGAGGAA 3479 Query 166450 GAAACATACAACATCGTAGCCGCTCATGGTTACTTCGGTCGTTT 166493 || || || || || || || ||||||||||| || || || || Sbjct 3480 GAGACTTATAATATTGTGGCTGCTCATGGTTATTTTGGCCGATT 3523 >seq788035 Length=1366 Score = 100 bits (110), Expect = 3e-16 Identities = 97/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 166426 GGTTACAAGTTCGGACAAGAAGAAGAAACATACAACATCGTAGCCGCTCATGGTTACTTC 166485 |||||||| || || ||||| |||||||| || ||||| || || ||| ||||||| | Sbjct 958 GGTTACAAATTTGGTCAAGAGGAAGAAACTTATAACATTGTGGCTGCTAATGGTTATATT 1017 Query 166486 GGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGCTCCTTGCACTTCTTCCTT 166545 || | || ||||||||||| ||| || |||||||| || || || ||||||||| | Sbjct 1018 GGCCAATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTTG 1077 Query 166546 GCTGC 166550 ||||| Sbjct 1078 GCTGC 1082 >seq761979 Length=10221 Score = 93.3 bits (102), Expect = 5e-14 Identities = 170/249 (68%), Gaps = 0/249 (0%) Strand=Plus/Minus Query 165912 TGAACCCGTCGCTGGTTCTCTGATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCC 165971 ||||| || || ||||| | | |||| ||||| || ||||||||||| || |||| Sbjct 461 TGAACATGTTTCTAGTTCTTTACTTTATGAAAACAATATTATCTCTGGTGCTATTATTCC 402 Query 165972 CTCTTCCAACGCAATTGGTCTACACTTCTATCCCATCTGGGAAGCCGCATCGCTTGACGA 166031 |||| | | || | ||||| || || || || ||| |||||| |||| || Sbjct 401 TACTTCGACGGTGATCAAATTGCACTTTTACCCAATTTGAAAAGTTGCATCGGTTGATGA 342 Query 166032 ATGGCTCTATAACGGTGGTCCTTTCCAACTGGTTGTCTTCCACTTCCTGATTGGCATCTA 166091 ||| | || || |||||||||| | || || | || |||||| | |||| | Sbjct 341 GTGGTTATACAATGGTGGTCCTTATGAGCTAATTTTTTTACACTTCTTACTTGGTGTAGC 282 Query 166092 TGCCTACATGGGTCGTGAGTGGGAACTGTCTTACCGTCTAGGTATGCGTCCATGGATCTG 166151 | || |||||| |||||| |||||| || |||||| ||||||| ||| || || Sbjct 281 TTGTTATATGGGTTGTGAGTAGGAACTTAGTTTCCGTCTGGGTATGCATCCTTGAATTGT 222 Query 166152 TGTTGCTTA 166160 |||||| || Sbjct 221 TGTTGCATA 213 >seq159272 Length=944 Score = 91.5 bits (100), Expect = 2e-13 Identities = 118/163 (72%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 167408 TCTCTGGTCCTATTGCTGTCTTCGTTAGCGTTTTCCTTCTCTATCCCCTCGGTCAAAGCA 167467 ||||||| || |||| | || ||| || |||||| | || || || || ||| Sbjct 305 TCTCTGGCCCAATTGTTCCTTTTGTTTTTGTATTCCTTATTTACCCACTTGGGCAATCTG 246 Query 167468 GCTGGTTCTTTGCCCCGTCCTTCGGAGTCGCCGCCATCTTCCGATTCCTCCTCTTCCTCC 167527 | |||||| |||| | || || | || || || || |||||| |||| ||| ||| Sbjct 245 GTTGGTTCATTGCATCTAGTTTTGGCATAGCAGCGATATTTCGATTCATCCTTTTCTTCC 186 Query 167528 AAGGATTCCACAACTGGACACTGAATCCATTTCATATGATGGG 167570 ||||||| || || |||||| |||| ||||||||||||||||| Sbjct 185 AAGGATTTCATAATTGGACATTGAACCCATTTCATATGATGGG 143 >seq214337 Length=7809 Score = 89.7 bits (98), Expect = 6e-13 Identities = 69/81 (85%), Gaps = 1/81 (1%) Strand=Plus/Plus Query 18120 TCCCTTCATTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGTAG 18179 ||| ||| |||||||||||||||| || ||||| ||| ||||||| || ||||||||| Sbjct 7010 TCCGTTC-TTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTAG 7068 Query 18180 GTTCAAATCCTACCTGGGGAG 18200 |||| |||||||| ||||||| Sbjct 7069 GTTCGAATCCTACTTGGGGAG 7089 >seq720956 Length=214 Score = 87.8 bits (96), Expect = 2e-12 Identities = 70/83 (84%), Gaps = 1/83 (1%) Strand=Plus/Plus Query 18118 CCTCCCTTCATTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGT 18177 || ||||| |||||||||||||||| || ||||| ||| ||||||| || ||||||| Sbjct 81 CCCCCCTTG-TTCCTCAGTAGCTCAGAGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGT 139 Query 18178 AGGTTCAAATCCTACCTGGGGAG 18200 |||||| |||||||| ||||||| Sbjct 140 AGGTTCGAATCCTACTTGGGGAG 162 >seq79754 Length=5746 Score = 87.8 bits (96), Expect = 2e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 167683 ACTCAGGAAGAAGAGACTTATTCAATGGTTACAGCAAACCGATTCTGGTCTCAGATCTTC 167742 ||||| | ||||| |||||||||||||| || || ||||| || ||||| || ||||| Sbjct 4820 ACTCAAGCTGAAGAAACTTATTCAATGGTCACTGCTAACCGTTTTTGGTCCCAAATCTTT 4879 Query 167743 GGCATTGCTTTCAGCAACAAACGCTGGCTTCATTTCTTTATGTTATTCGTTCCCGT 167798 | ||||||| ||| ||| | ||| | |||||||||||| |||| || | ||| Sbjct 4880 GATGTTGCTTTTTCCAATAAATGTTGGTTACATTTCTTTATGCTATTTGTACTCGT 4935 >seq738789 Length=219 Score = 84.2 bits (92), Expect = 2e-11 Identities = 68/81 (84%), Gaps = 1/81 (1%) Strand=Plus/Plus Query 18118 CCTCCCTTCATTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGT 18177 || ||||| |||||||||||||||| || ||||| ||| ||||||| || ||||||| Sbjct 30 CCCCCCTTG-TTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGT 88 Query 18178 AGGTTCAAATCCTACCTGGGG 18198 |||||| |||||||| ||||| Sbjct 89 AGGTTCGAATCCTACTTGGGG 109 >seq702526 Length=229 Score = 84.2 bits (92), Expect = 2e-11 Identities = 69/83 (83%), Gaps = 1/83 (1%) Strand=Plus/Minus Query 18118 CCTCCCTTCATTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGT 18177 || ||||| |||||||||||||||| || ||||| ||| ||||||| || | ||||| Sbjct 170 CCCCCCTTG-TTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTTGTCGT 112 Query 18178 AGGTTCAAATCCTACCTGGGGAG 18200 |||||| |||||||| ||||||| Sbjct 111 AGGTTCGAATCCTACTTGGGGAG 89 >seq657508 Length=227 Score = 84.2 bits (92), Expect = 2e-11 Identities = 69/83 (83%), Gaps = 1/83 (1%) Strand=Plus/Minus Query 18118 CCTCCCTTCATTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGT 18177 || ||||| ||||||| |||||||| || ||||| ||| ||||||| || ||||||| Sbjct 127 CCCCCCTTG-TTCCTCACTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGT 69 Query 18178 AGGTTCAAATCCTACCTGGGGAG 18200 |||||| |||||||| ||||||| Sbjct 68 AGGTTCGAATCCTACTTGGGGAG 46 >seq57130 Length=3464 Score = 84.2 bits (92), Expect = 2e-11 Identities = 69/83 (83%), Gaps = 1/83 (1%) Strand=Plus/Minus Query 18118 CCTCCCTTCATTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGT 18177 || ||||| |||||||||||||||| || ||||| | | ||||||| || ||||||| Sbjct 2256 CCCCCCTTG-TTCCTCAGTAGCTCAGTGGTAGAGCGGTTGGCTGTTAACTGACTGGTCGT 2198 Query 18178 AGGTTCAAATCCTACCTGGGGAG 18200 |||||| |||||||| ||||||| Sbjct 2197 AGGTTCGAATCCTACTTGGGGAG 2175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548490692648000