Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20pubiflorum_20[genbank_20GCA_5F000582825.1_202013-08-30] 1,818,420 sequences; 1,425,274,558 total letters Query= NC_021190.1 Length=46150 Score E Sequences producing significant alignments: (Bits) Value seq747945 439 7e-119 >seq747945 Length=243 Score = 439 bits (486), Expect = 7e-119 Identities = 243/243 (100%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 39606 AATGAACTCGAAAAGGTTTCGTTCGACCCTGCGTGTGATTTGCTGATTTCGGTTGGAGAC 39665 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 AATGAACTCGAAAAGGTTTCGTTCGACCCTGCGTGTGATTTGCTGATTTCGGTTGGAGAC 60 Query 39666 CTTGTTGACCGCGGCGCGGAAAACGTCGAGTGCCTGGAGCTGATTACTATGCCTTGGTTC 39725 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 CTTGTTGACCGCGGCGCGGAAAACGTCGAGTGCCTGGAGCTGATTACTATGCCTTGGTTC 120 Query 39726 CGGGCTGTGCGAGGTAACCATGAGCAGATGATGATTGATGGGCTATCGGAGTATGGAAAC 39785 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 CGGGCTGTGCGAGGTAACCATGAGCAGATGATGATTGATGGGCTATCGGAGTATGGAAAC 180 Query 39786 GTTAACCACTGGCTGGAAAACGGCGGCGTGTGGTTCTTCAGTCTTGATTATGAAAAAGAG 39845 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 GTTAACCACTGGCTGGAAAACGGCGGCGTGTGGTTCTTCAGTCTTGATTATGAAAAAGAG 240 Query 39846 GTG 39848 ||| Sbjct 241 GTG 243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144372062644480