Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20pubiflorum_20[genbank_20GCA_5F000582825.1_202013-08-30] 1,818,420 sequences; 1,425,274,558 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq78186 235 7e-56 seq27814 150 2e-30 seq765561 138 1e-26 seq760772 136 5e-26 seq74324 134 2e-25 seq710647 123 3e-22 seq78343 123 3e-22 seq523966 122 1e-21 seq706393 109 7e-18 seq563044 109 7e-18 seq749338 105 8e-17 seq422828 105 8e-17 seq786759 104 3e-16 seq7115 104 3e-16 seq761016 102 1e-15 seq43848 102 1e-15 seq777517 100 3e-15 seq754598 100 3e-15 seq40909 100 3e-15 seq78991 98.7 1e-14 seq36535 98.7 1e-14 seq1767970 96.9 4e-14 seq566871 96.9 4e-14 seq196788 96.9 4e-14 seq150336 96.9 4e-14 seq1748883 95.1 1e-13 seq88477 95.1 1e-13 seq136358 93.3 5e-13 seq4731 93.3 5e-13 seq799712 91.5 2e-12 seq765972 91.5 2e-12 seq785615 86.0 7e-11 >seq78186 Length=6745 Score = 235 bits (260), Expect = 7e-56 Identities = 226/289 (78%), Gaps = 3/289 (1%) Strand=Plus/Minus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 ||||||||||||||||||||||||||||||||||| |||||||| |||| || || || Sbjct 593 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGGCCCTGGCCTCGGCGACCTGC 534 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 || || |||||||| | ||| ||||||||| ||||||||||||| ||||||||| Sbjct 533 ACGTCGGACATGAACCTGGAGGCGAGGTTCTCGAGCACGATGCCGTCGGAGGCGGCGAAG 474 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAG---CGACACCCAGTGG 869809 || || || ||||| ||| |||||||||||||||| | ||| | |||||||| Sbjct 473 AAGGCGAGCACGTGGGAGATGAAGTGGCGCTCGTCGTTGGAGAGGGTGGTGTCCCAGTGG 414 Query 869810 ACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTG 869869 | ||||| | |||||||||||||||||||||||||| |||||| | ||||| ||| Sbjct 413 CGCGCGTCGGAGGAGAGGTCCACCTCCTCGGCGGTCCAGAAGGAGGCCACCGCCTTCTTG 354 Query 869870 TACATCTCCCATACTTGCTGGTAGCGGATAGGGAAGAGGACAAAGCGGT 869918 || | |||||| | ||| || | ||||| ||||| | | ||||||| Sbjct 353 TAGAACTCCCAGATCTGCGGGAACCGGATGGGGAACATGGAGAAGCGGT 305 Score = 228 bits (252), Expect = 1e-53 Identities = 250/330 (76%), Gaps = 8/330 (2%) Strand=Plus/Minus Query 868678 GGACGAGACGTGCGCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCC 868737 |||| |||| |||||| ||||||||| |||||| |||||| |||||||||||||| Sbjct 1200 GGACATGACGGACGCCTTCTGGTACTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCC 1141 Query 868738 CTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCA 868797 || |||||||| | ||||||||| ||||||||||| | ||||| |||| | ||| Sbjct 1140 CTGCAGCGAGATGAGCTCCATCCAGTCGAACGGGTTGGTGGCGTTGTACAGCTTGTTGCA 1081 Query 868798 TCCGAGCGACGCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGC 868857 || |||| | |||||||||||||||||| |||||||||||||||| ||||||| || | Sbjct 1080 GCCCAGCGCCATGAGCAGGCGGTCGGCGACGAACTCGATGTACTGGCTCATGAGGTCGCC 1021 Query 868858 GTTCATGCCGATGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGAC 868917 ||||||||| | |||||| || |||| |||| || ||||| ||||||| || || Sbjct 1020 GTTCATGCCCACGAGCGCGCAGGGGAGCGCGTCGCAGACGAACTCCCTCTCGATGTCCAC 961 Query 868918 GGCCTCGACGATGATCT----GCCTGGGCACGTCGGCCGAGGGCTTGTTGACGAGCATCG 868973 |||||| || ||||| | | || || ||| || ||||| | || || Sbjct 960 GGCCTCCGAGACGATCTCGAAGACGCGGGAC-TCGTCC---AGCTTGCCGCGCAGGATGT 905 Query 868974 TGTAGAGCAGGCAGGCAAAGTCGCAGTGCA 869003 |||||| |||||||| ||||||||||||| Sbjct 904 CGTAGAGGAGGCAGGCGAAGTCGCAGTGCA 875 Score = 188 bits (208), Expect = 9e-42 Identities = 213/284 (75%), Gaps = 6/284 (2%) Strand=Plus/Minus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || |||||||| ||| | |||||| |||| |||||| ||||||||||| |||||| Sbjct 872 CCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCCGGCATGAGGCCCCGCTTC 813 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 |||||||| |||||||||||||| ||||||||| ||||||||||||||| ||| ||| Sbjct 812 TTGAGCCAGAAGATGGCGCAGAAGGAGCCCGAGAAGAAGATGCCCTCGACGCAGGCGAAG 753 Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCAG 869359 ||| || |||||||| ||| || ||| || || |||||| || ||||||| Sbjct 752 GCGACGATGCGCTCGGCGAAG----CGCTCCCCGCC--GTCGATCCAGCGCAGCGCCCAG 699 Query 869360 TCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTTTCG 869419 |||||||| | || | ||| | |||||||||||||| |||||| ||||||| ||| Sbjct 698 TCGGCCTTGCGGCGGACGGCCGGGATGGTGTCGATGGCGCGGAAGAGGCGGTCCTTCTCG 639 Query 869420 GCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 | ||| || ||||| ||||| || || || || |||| Sbjct 638 ACGTCGTCGCGGATGTAGGTCTCGATGAGCAGGGAGTACATCTC 595 >seq27814 Length=431 Score = 150 bits (166), Expect = 2e-30 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| ||| ||| ||| || || || || |||||||||||||| || | | || Sbjct 247 GCTTGGCCAATTCTCCGGGCAGGAGGAGACGGACAGCGGTCTGGATCTCCCGAGAGGTGA 188 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| | |||||| |||| || ||||||| |||||||| | |||| | |||| | Sbjct 187 TGGTGGACCTCTTGTTGTAGTGGGCGAGACGGCTGGCCTCGGCGGCGATCCTCTCGAAGA 128 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || ||||||||||||| ||||| | |||| ||||||| || |||||||| Sbjct 127 TGTCGTTCACGAACGAGTTCATGATGGACATGGCCTTGCTGGAGATACCGGTGTCGGGGT 68 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | || || || ||||| ||||| ||| Sbjct 67 GGACTTGTTTCAGCACTTTGTAAATG 42 >seq765561 Length=3273 Score = 138 bits (152), Expect = 1e-26 Identities = 141/184 (77%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 1592113 CACCGACGACATCTCGCCGTGGGACAAGGAGTTTTGCGACGTCGAGCAGCCCACCCTCTT 1592172 |||||| | |||| | ||||||| || || | | ||||| ||| ||||||||| Sbjct 1584 CACCGAAGGCATCAAGAGCTGGGACACCGACTTCATCAAGGTCGACCAGGCCACCCTCTA 1643 Query 1592173 TGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAA 1592232 || | ||||| || || || ||||| ||||||||| ||||||| ||| ||| | Sbjct 1644 CGACCTCATCCTGGCTGCAAATTACCTTGACATCAAGGGATTGCTCGACCTTACTTGCCA 1703 Query 1592233 GTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACAT 1592292 | |||| ||| ||||||||||||||||| | ||||||||||||||||||||||| || || Sbjct 1704 GACTGTTGCCGACATGATCAAGGGCAAGACTCCCGAGGAGATCCGCAAGACCTTCAATAT 1763 Query 1592293 CAAG 1592296 |||| Sbjct 1764 CAAG 1767 >seq760772 Length=2268 Score = 136 bits (150), Expect = 5e-26 Identities = 154/206 (75%), Gaps = 3/206 (1%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||||| | || |||||| ||| |||| ||||||| || ||| Sbjct 1859 GCTTGGCGAGCTCGCCGCGGAGGACGAGGCGCGCGGAGGTCCGGATCTCCCGGTGGCCAG 1918 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | | || |||||| || | || || | ||||||||||| | ||| | |||| || Sbjct 1919 TGGGCTT---CTTGTTGTAGCGGGCGAGCCTGCCGGCCTCGGCGGCGAGCCTCTCGAACA 1975 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| || ||||||||| | ||||| | |||| || ||||||| | |||||| Sbjct 1976 TGTCGTTGAGGAAGGAGTTCATGGCGGACATGGCCTTGGAGGTCATGCCCATGCCGGGGT 2035 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 |||||| || ||||||| |||||||| Sbjct 2036 GCACCTCCTCGAGCACCGTGTAGATG 2061 >seq74324 Length=1335 Score = 134 bits (148), Expect = 2e-25 Identities = 116/144 (81%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 1592153 GTCGAGCAGCCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCT 1592212 ||||| ||| |||||||||| || | ||||| || || ||||||||| |||||||| Sbjct 945 GTCGACCAGACCACCCTCTTCGACCTCATCCTGGCTGCAAACTACCTCAACATCAAGGGA 1004 Query 1592213 CTGCTCGATCTTGGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAG 1592272 ||||||| ||| ||| || |||| || ||||||||||||||||| | || |||||| Sbjct 1005 TTGCTCGACCTTACTTGCCAGACTGTTGCAGACATGATCAAGGGCAAGACTCCGGAGGAG 1064 Query 1592273 ATCCGCAAGACCTTTAACATCAAG 1592296 ||||||||||| || ||||||||| Sbjct 1065 ATCCGCAAGACTTTCAACATCAAG 1088 >seq710647 Length=239 Score = 123 bits (136), Expect = 3e-22 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || ||||| |||| |||||||||||| || | || Sbjct 236 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTGGATCTCCCGGGACGTGA 177 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| | ||||||| | | | |||| | | | |||| | Sbjct 176 TGGTGGGCTTCTTGTTGTACCGCGCCAGCTTGGCCGACTCGCCGGCCAGCTTCTCGAAGA 117 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| ||| |||||||||| ||||| | |||| ||||||||| | ||| |||| Sbjct 116 TGTCGTTGATAAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCCGGGT 57 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 |||||||||||||||||||| ||||| Sbjct 56 GCACCTGCTTGAGCACCTTGAAGATG 31 >seq78343 Length=5600 Score = 123 bits (136), Expect = 3e-22 Identities = 114/143 (80%), Gaps = 1/143 (1%) Strand=Plus/Minus Query 1592153 GTCGAGCAGCCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCT 1592212 ||||| ||| |||||||||| || | ||||| || || |||| |||| |||||||| Sbjct 4009 GTCGACCAGGCCACCCTCTTCGACCTCATCCT-GCTGCAAACTTCCTCAACATCAAGGGA 3951 Query 1592213 CTGCTCGATCTTGGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAG 1592272 ||||||| ||| ||| || |||| ||| ||||||||||||||||| | || |||||| Sbjct 3950 GTGCTCGACCTTACTTGCCAGACTGTCGCCGACATGATCAAGGGCAAGACTCCGGAGGAG 3891 Query 1592273 ATCCGCAAGACCTTTAACATCAA 1592295 ||||| |||| ||||||||||| Sbjct 3890 GTCCGCGAGACTTTTAACATCAA 3868 >seq523966 Length=221 Score = 122 bits (134), Expect = 1e-21 Identities = 147/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || ||||| |||| |||||||||||| || | | || Sbjct 201 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTGGATCTCCCGGGAGGTGA 142 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| || | ||||| | ||| ||| | ||| |||| | Sbjct 141 TGGTGGGCTTCTTGTTGTAGCGGGCCAGTTTGGCGGATTCGCCGGCGAGCTTCTCGAAGA 82 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| || |||||||||| ||||| | |||| ||||||||| | |||||||| Sbjct 81 TGTCGTTGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGT 22 Query 1254523 GCACCTGCTTGAGCACCTTG 1254542 |||||||||| ||||||||| Sbjct 21 GCACCTGCTTCAGCACCTTG 2 >seq706393 Length=209 Score = 109 bits (120), Expect = 7e-18 Identities = 132/180 (73%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 1254369 AGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTGTTGCGCTTGTTCGAGTGCGCC 1254428 ||||| |||| |||||||||||| || | ||| ||| |||||| | ||||| Sbjct 197 AGGCGGACGGAGGTCTGGATCTCCCGGGACGTGATGGTGGGCTTCTTGTTGTACCGCGCC 138 Query 1254429 AGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACC 1254488 || | ||| |||| | ||| |||| | |||||||| || |||||||||| Sbjct 137 AGCTTGGCGGACTCGCCGGCGAGCTTCTCGAAGAGGTCGTTGATGAAGGAGTTCATGATG 78 Query 1254489 GACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAGATG 1254548 ||||| | |||| ||||||||| | ||| |||||||||||||| ||||||||| ||||| Sbjct 77 GACATGGCCTTGGAGGAGATGCCGATGTCCGGGTGCACCTGCTTCAGCACCTTGAAGATG 18 >seq563044 Length=213 Score = 109 bits (120), Expect = 7e-18 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || ||||| |||| |||||||||||| || | | || Sbjct 13 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTGGATCTCCCGGGAGGTGA 72 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| || | || || | |||||||| | ||| |||| | Sbjct 73 TGGTGGGCTTCTTGTTGTAGCGAGCGAGCTTGGCGGCCTCGCCGGCGAGCTTCTCGAAGA 132 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| || || ||| ||||| | |||| ||||||||| | |||||||| Sbjct 133 TGTCGTTGATGAAGGANNNNNTGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGT 192 Query 1254523 GCACCTGCTTGAGCACCTTG 1254542 |||||||||| ||||||||| Sbjct 193 GCACCTGCTTCAGCACCTTG 212 >seq749338 Length=5013 Score = 105 bits (116), Expect = 8e-17 Identities = 90/111 (81%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || ||||||||||| |||||||| ||||| || || || || |||| ||| || Sbjct 607 GCTGCCAACTACCTGAACATCAAGGGGCTGCTGGACCTGACCTGTCAGACTGTTGCCGAC 666 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAG 1592296 ||||||||||||||| | || |||||||||||||||||||| ||||||||| Sbjct 667 ATGATCAAGGGCAAGACCCCAGAGGAGATCCGCAAGACCTTCAACATCAAG 717 >seq422828 Length=226 Score = 105 bits (116), Expect = 8e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || ||||| |||| |||||||||||| || | || Sbjct 223 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTGGATCTCCCGGGACGTGA 164 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| | ||||||| | | | |||| | | | || | | Sbjct 163 TGGTGGGCTTCTTGTTGTACCGCGCCAGCTTGGCCGACTCGCCGGCCAGCTTCTCAAAGA 104 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| || |||||||||| ||||| | |||| |||||||| | ||| |||| Sbjct 103 TGTCGTTGATGAAGGAGTTCATGATGGACATGGCCTTGGAAGAGATGCCGATGTCCGGGT 44 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 |||||||||| ||||||||| ||||| Sbjct 43 GCACCTGCTTCAGCACCTTGAAGATG 18 >seq786759 Length=1664 Score = 104 bits (114), Expect = 3e-16 Identities = 114/152 (75%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 1592149 CGACGTCGAGCAGCCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAA 1592208 || |||||| ||| |||| || | || | ||||| |||||||||||||| || |||| Sbjct 625 CGCCGTCGACCAGGCCACGCTGTACGACCTCATCCTGGCCGCCAACTACCTGGAGGTCAA 684 Query 1592209 GCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGA 1592268 || || || || | ||| || | |||||| ||||||||||||||||| | || Sbjct 685 TGGGCTCCTGGACCTCTGCTGCCAGACGGTGGCCGACATGATCAAGGGCAAGAAGGTGGA 744 Query 1592269 GGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 |||||| |||||||| || |||||| ||| || Sbjct 745 GGAGATACGCAAGACGTTCAACATCGAGTGCG 776 >seq7115 Length=7031 Score = 104 bits (114), Expect = 3e-16 Identities = 149/209 (71%), Gaps = 6/209 (3%) Strand=Plus/Minus Query 1572380 CCGGTCGAGCCAAAGCCGCCGCTGCCGCGCTCGGTGTCGTCCAGCGAGTCGACCCACTCG 1572439 ||||| || || |||||||| ||| || ||||| |||| || |||| || |||| Sbjct 1706 CCGGTGGACCCGAAGCCGCCCTCGCCCCGGACGGTGGCGTCGAG---GTCGTCCACCTCG 1650 Query 1572440 GGCTCG---GGTTGGGCAATCTTTTCGATGAGCAACTGGGCGATGCGCGCCTCGCCCTGG 1572496 | || || ||| ||| |||| || || ||| |||| ||| || || || | Sbjct 1649 GCGACGTCCGGCGTGGCGATCCGCTCGACGACCAGCTGCGCGACGCGGTCCCCGGGCTTG 1590 Query 1572497 ACAACGTGGTCGGCGTCGGTGTGGTTGAAGAGCACGACGCCCACCTCGCCGCGATAGTCG 1572556 || || ||||||||| | |||||||||||| |||||||| || ||| || |||||| Sbjct 1589 ACGGCGAAGTCGGCGTCCGAGTGGTTGAAGAGGACGACGCCGACGGGGCCCCGGTAGTCG 1530 Query 1572557 GCATCGATGACGCCTGCGCCGACGTCGAT 1572585 || || | ||||| ||||| |||||||| Sbjct 1529 GCGTCCACCACGCCCGCGCCCACGTCGAT 1501 >seq761016 Length=9659 Score = 102 bits (112), Expect = 1e-15 Identities = 174/249 (70%), Gaps = 14/249 (6%) Strand=Plus/Plus Query 96852 GGCTCGATGACGGGCGCGCCCAAGGCGCGCAGCATGGAGATTCTCGATCGCCTCGAGAAG 96911 ||||||||||||||||| || |||| | |||||||| || ||| || ||| || Sbjct 5355 GGCTCGATGACGGGCGCCCCGAAGGTCAGGTCGATGGAGATCCTTGATGCGCTTGAG-AG 5413 Query 96912 CACCGCCCGCGCGGGATCTACTCGGGCGCGCTGGGCtttttttCGGCCGACGGCGCCTGC 96971 || ||||| | || ||||||||||| || | || || || ||| | || || | | | Sbjct 5414 CA--GCCCGAGAGGCATCTACTCGGGGTCGATCGGGTTCTTCTCGTACAACCGCACGTTC 5471 Query 96972 AGCCTGTCGGTGGTGATCCGCACGGCCGT----CATCGACGCGGACGGCTCGGCGTCGGT 97027 |||| | |||||||| |||| || ||| |||| ||| ||| ||||| Sbjct 5472 GACCTGAACATCGTGATCCGGACGGTGGTGCTGCAT-GACGGGGA------GGCCTCGGT 5524 Query 97028 GGGCTGCGGCGGCGCCATCGTCGCCGACTCGGACCCCGACGCCGAGTTTGCCGAGATTGT 97087 ||| ||||| |||||||| || |||||||| || || |||| |||||||| | Sbjct 5525 CGGCGCGGGCGGGGCCATCGTGGCGCTGTCGGACCCGGAGGCGGAGTACGCCGAGATGAT 5584 Query 97088 GCTCAAGGC 97096 ||||||||| Sbjct 5585 GCTCAAGGC 5593 >seq43848 Length=6340 Score = 102 bits (112), Expect = 1e-15 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || ||||||| ||||||| ||| || | | || Sbjct 2596 GCTTGGCGAGCTCGCCGGGGAGGACAAGGCGCATACATGTCTGGAACTCTCGGGAGGTGA 2537 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| |||| || || | ||||||| ||| |||| || Sbjct 2536 TGGTGGGCTTCTTGTTGTAGTGGGCAAGCTTGGCGGCCTCACCTGCGAGCTTCTCGAACA 2477 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| | |||||||||| ||||| | |||| |||||||| | |||||||| Sbjct 2476 TGTCGTTGATGTAGGAGTTCATGATGGACATGGCCTTGGATGAGATGCCAATGTCGGGGT 2417 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||| ||||||||||||| ||||| Sbjct 2416 GGACCTACTTGAGCACCTTGAAGATG 2391 >seq777517 Length=6662 Score = 100 bits (110), Expect = 3e-15 Identities = 108/142 (76%), Gaps = 1/142 (1%) Strand=Plus/Plus Query 1592153 GTCGAGCAGCCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCT 1592212 ||||| ||| |||||||||| || | ||||| || || ||||||||| ||||||| Sbjct 5893 GTCGACCAGGCCACCCTCTTCGACCTCATCCTGGCTGCAAACTACCTCAACATCAAAGGA 5952 Query 1592213 CTGCTCGATCTTGGGTGCAAGTCTGTG-GCCAACATGATCAAGGGCAAGTCGCCCGAGGA 1592271 |||| |||||| ||| || || | ||| |||||||||| || || | ||||| Sbjct 5953 ATGCTGGATCTTACTTGCCAGACTCTTTGCCGACATGATCAAAGGTAATACTGTTGAGGA 6012 Query 1592272 GATCCGCAAGACCTTTAACATC 1592293 ||||||||||||||| |||||| Sbjct 6013 GATCCGCAAGACCTTCAACATC 6034 >seq754598 Length=1511 Score = 100 bits (110), Expect = 3e-15 Identities = 78/93 (84%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 1254456 TCGATCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACG 1254515 |||| |||||||||| || |||||||||| ||||| | |||| ||||||||| | | Sbjct 3 TCGAAGATGTCGTTGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATG 62 Query 1254516 TCGGGGTGCACCTGCTTGAGCACCTTGTAGATG 1254548 || |||||||||||||||||||||||| ||||| Sbjct 63 TCCGGGTGCACCTGCTTGAGCACCTTGAAGATG 95 >seq40909 Length=3437 Score = 100 bits (110), Expect = 3e-15 Identities = 91/115 (79%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 ||||| |||| ||| |||||||| || || || || ||| || |||| || || Sbjct 2457 GCCGCAAACTTCCTGAACATCAAGGGCCTACTGGACCTGACCTGCCAGACTGTTGCGGAC 2398 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||||||||||||| | || |||||||||||||||||||| ||||||||| ||| Sbjct 2397 ATGATCAAGGGCAAGACCCCTGAGGAGATCCGCAAGACCTTCAACATCAAGAACG 2343 >seq78991 Length=5764 Score = 98.7 bits (108), Expect = 1e-14 Identities = 74/87 (85%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 1254462 ATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGG 1254521 |||||||||| || |||||||||| ||||| | |||| ||||||||| | ||| ||| Sbjct 104 ATGTCGTTGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCCGGG 45 Query 1254522 TGCACCTGCTTGAGCACCTTGTAGATG 1254548 ||||||||||||||||||||| ||||| Sbjct 44 TGCACCTGCTTGAGCACCTTGAAGATG 18 >seq36535 Length=7227 Score = 98.7 bits (108), Expect = 1e-14 Identities = 101/132 (77%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 1592165 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTT 1592224 |||| ||| || | ||| ||| ||||||||||||||||||||| |||| || ||| Sbjct 6716 ACCCCCTTCGACCTCATCAACGCTGCCAACTACCTCGACATCAAGGGATTGCTGGACCTT 6657 Query 1592225 GGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACC 1592284 ||| || ||| || ||| ||||||| ||| | | || ||||||||||||||| || Sbjct 6656 ACTTGCCAGGCTGCTGCTGACAAGATCAAGCGCATGACTCCGGAGGAGATCCGCAAGGCC 6597 Query 1592285 TTTAACATCAAG 1592296 || ||||||||| Sbjct 6596 TTCAACATCAAG 6585 >seq1767970 Length=1240 Score = 96.9 bits (106), Expect = 4e-14 Identities = 125/170 (74%), Gaps = 2/170 (1%) Strand=Plus/Plus Query 1254380 GGTCTGGATCTCGCGCGTGCCGATCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGC 1254439 |||||||||||| || | | ||||||| |||||| | || || | |||| Sbjct 2 GGTCTGGATCTCCCGGGAGGTGATCGTGGGCTTCTTGTTGTACCTGGCGAGCTTGGCGGC 61 Query 1254440 CTCGGTGC-CGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACCGACATCGACT 1254498 ||| ||| ||| |||| |||||||||| || |||||||||| ||||| | || Sbjct 62 CTCC-TGCGCGAGCTTCTCGAAGATGTCGTTGATGAAGGAGTTCATGATGGACATGGCCT 120 Query 1254499 TGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAGATG 1254548 || ||||||||| | ||| |||||||||||||| ||||||||| ||||| Sbjct 121 TGGAGGAGATGCCAATGTCCGGGTGCACCTGCTTCAGCACCTTGAAGATG 170 >seq566871 Length=205 Score = 96.9 bits (106), Expect = 4e-14 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || ||||| |||| |||||||||||| || || Sbjct 193 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTGGATCTCCCGNNNNNTGA 134 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| | ||| || | | | ||| | ||| |||| | Sbjct 133 TGGTGGGCTTCTTGTTGTACCTCGCAAGCTTGGCCGACTCCCCGGCGAGCTTCTCGAAGA 74 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| || |||||||||| ||||| | |||| ||||||||| | |||||||| Sbjct 73 TGTCGTTGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGT 14 Query 1254523 GCACCTGCTTGAG 1254535 ||||||||||||| Sbjct 13 GCACCTGCTTGAG 1 >seq196788 Length=770 Score = 96.9 bits (106), Expect = 4e-14 Identities = 77/93 (83%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 1254456 TCGATCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACG 1254515 |||| |||||||||| || |||||||||| ||||| | |||| ||||||||| | | Sbjct 743 TCGAAGATGTCGTTGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATG 684 Query 1254516 TCGGGGTGCACCTGCTTGAGCACCTTGTAGATG 1254548 |||||||| || ||||||||||||||| ||||| Sbjct 683 TCGGGGTGGACTTGCTTGAGCACCTTGAAGATG 651 >seq150336 Length=1587 Score = 96.9 bits (106), Expect = 4e-14 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || ||||| | | || ||||||||||||||||||||||| || | | || Sbjct 97 GCTTGGCAAGCTCGCCCGGAAGGACAAGGCGCACGGCGGTCTGGATCTCACGGGAGGTGA 156 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| |||| || || || | ||| | ||| || | | Sbjct 157 TGGTGGGCTTCTTGTTGTAGTGTGCGAGCTTTCCCGACTCACCGGCGAGCTTCTCAAAGA 216 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| || | | ||||| |||| |||| |||||| |||||| |||| || |||| Sbjct 217 TGTCATTCATCATTGAGTTGATGATGCACATTGACTTGGAGGAGATTCCCATGTTCGGGT 276 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||||||||||||| ||||| Sbjct 277 GAACCTGCTTGAGCACCTTGAAGATG 302 >seq1748883 Length=8396 Score = 95.1 bits (104), Expect = 1e-13 Identities = 98/128 (77%), Gaps = 3/128 (2%) Strand=Plus/Plus Query 1349434 GCCAAGGGCGTCGCCTACCTGCAC---GGTCTCGACCCGCCCATCGTGCACCGCGACCTC 1349490 ||||||| | |||| ||||||||| | | ||||||||||| ||||||||| || Sbjct 6487 GCCAAGGCCATCGCGTACCTGCACTCGGAGGTGCACCCGCCCATCTACCACCGCGACATC 6546 Query 1349491 AAGAGCGGCAACCTGCTGGTCGACCAAAACTACAACGTCAAGGTGGCCGACTTTGGCCTG 1349550 ||| | ||||| | ||| ||||||| | |||||| ||||||||||||||| || ||| Sbjct 6547 AAGTCCAGCAACATCCTGCTCGACCACGAGTACAACTCCAAGGTGGCCGACTTCGGGCTG 6606 Query 1349551 GCGCGCAT 1349558 |||| || Sbjct 6607 TCGCGGAT 6614 >seq88477 Length=1713 Score = 95.1 bits (104), Expect = 1e-13 Identities = 96/123 (78%), Gaps = 3/123 (2%) Strand=Plus/Plus Query 1349427 GTCGGCGGCCAAGGGCGTCGCCTACCTGCACGGTCTCGACCCGCCCATCGTGCACCGCGA 1349486 ||| ||||| || || || ||||||| |||| |||| |||||||||||||||||||| Sbjct 841 GTCCGCGGC--AGCGC-TCACCTACCTCCACGCAATCGAGCCGCCCATCGTGCACCGCGA 897 Query 1349487 CCTCAAGAGCGGCAACCTGCTGGTCGACCAAAACTACAACGTCAAGGTGGCCGACTTTGG 1349546 | |||||| | |||| | || ||||| ||| | |||||||||| |||||||| || Sbjct 898 CGTCAAGACCAACAACATCCTCCTCGACACCGACTTCCACGTCAAGGTCGCCGACTTCGG 957 Query 1349547 CCT 1349549 ||| Sbjct 958 CCT 960 >seq136358 Length=6576 Score = 93.3 bits (102), Expect = 5e-13 Identities = 86/109 (79%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || || |||||||| ||||||||| || || || || ||| || | || || || Sbjct 1247 GCTGCGAACTACCTGGACATCAAGGGGCTCCTGGACCTGACCTGCCAGACGGTCGCTGAC 1306 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCA 1592294 ||||||||||||||| | || |||||||||||||||||||| ||||||| Sbjct 1307 ATGATCAAGGGCAAGACTCCGGAGGAGATCCGCAAGACCTTCAACATCA 1355 >seq4731 Length=10017 Score = 93.3 bits (102), Expect = 5e-13 Identities = 167/242 (69%), Gaps = 9/242 (4%) Strand=Plus/Minus Query 1572380 CCGGTCGAGCCAAAGCCGCCGCTGCCGCGCTCGGTGTCGTCCAGCGAGTCGACCCACTCG 1572439 ||||| || || || ||||| ||||| | ||| |||| || ||| || |||| Sbjct 3166 CCGGTGGACCCGAACCCGCCCTCCCCGCGGACTGTGGCGTCGAG---GTCCTCCACCTCG 3110 Query 1572440 GG---CTCGGGTTGGGCAATCTTTTCGATGAGCAACTGGGCGATGCGCGCCTCGCCCTGG 1572496 | ||| || ||| ||| | || || || ||| |||| ||| | || || Sbjct 3109 GCGACCTCCGGCGTGGCGATCACCTGGACGATCATCTGTGCGACGCGGTCGCCGGGCTTC 3050 Query 1572497 ACAACGTGGTCGGCGTCGGTGTGGTTGAAGAGCACGACGCCCACCTCGCCGCGATAGTCG 1572556 || || ||| || || | ||||||||||||||| ||||||||| |||||| |||||| Sbjct 3049 ACGGCGAAGTCCGCATCCGAGTGGTTGAAGAGCACCACGCCCACCGGGCCGCGGTAGTCG 2990 Query 1572557 GCATCGATGACGCCTGCGCCGACGTCGATGCC---CCTGACGGCCAGGGACGAGCGCGGC 1572613 || ||||| || || ||||| ||||||||| | | | | |||||| ||| | |||| Sbjct 2989 GCGTCGATCACCCCGGCGCCCACGTCGATGGCGTGCTTCAGCGCCAGGCCCGACCTCGGC 2930 Query 1572614 GC 1572615 || Sbjct 2929 GC 2928 >seq799712 Length=1504 Score = 91.5 bits (100), Expect = 2e-12 Identities = 76/93 (82%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 1254456 TCGATCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACG 1254515 |||| |||||||||| || |||||||||| ||||| | |||| ||| ||||| | | Sbjct 1474 TCGAAGATGTCGTTGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAAATGCCTATG 1415 Query 1254516 TCGGGGTGCACCTGCTTGAGCACCTTGTAGATG 1254548 || |||||||||||||| ||||||||| ||||| Sbjct 1414 TCCGGGTGCACCTGCTTCAGCACCTTGAAGATG 1382 >seq765972 Length=3892 Score = 91.5 bits (100), Expect = 2e-12 Identities = 67/78 (86%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 868796 CATCCGAGCGACGCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCG 868855 || || |||| | |||||||||| ||||||||||||| |||||||||| ||||||| || Sbjct 2680 CAGCCCAGCGCCATGAGCAGGCGGGCGGCGACAAACTCAATGTACTGGCTCATGAGGTCG 2621 Query 868856 GCGTTCATGCCGATGAGC 868873 |||||||||||| |||| Sbjct 2620 CCGTTCATGCCGACGAGC 2603 >seq785615 Length=1789 Score = 86.0 bits (94), Expect = 7e-11 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 1254474 AACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTG 1254533 || |||||||||| ||||| | |||| ||||||||| | ||| ||||||||||||||| Sbjct 1784 AAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCCGGGTGCACCTGCTTG 1725 Query 1254534 AGCACCTTGTAGATG 1254548 ||||||||| ||||| Sbjct 1724 AGCACCTTGAAGATG 1710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5957911139139140