Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hordeum_20pubiflorum_20[genbank_20GCA_5F000582825.1_202013-08-30]
1,818,420 sequences; 1,425,274,558 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq752483 143 5e-29
seq1743593 127 4e-24
seq41905 127 4e-24
seq765366 122 2e-22
seq752332 122 2e-22
seq750497 122 2e-22
seq774391 113 9e-20
seq36911 104 4e-17
seq5304 100 5e-16
seq786636 95.1 2e-14
seq76768 91.5 3e-13
seq1745301 89.7 1e-12
seq7669 87.8 3e-12
seq5142 86.0 1e-11
>seq752483
Length=2742
Score = 143 bits (158), Expect = 5e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| || ||||| || ||||| | ||| || || || || ||||| || || |||||||
Sbjct 1210 CCACCCCTCAACCGAAGAACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGCC 1151
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
| | | || ||||| |||||||| ||||||||||| || || ||||| ||||| ||
Sbjct 1150 AAGGTGCGGCCATCTTCCAGTTGTTTCCCAGCAAAGATAAGCCTCTGTTGGTCTGGTGGG 1091
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| || ||||| || || |||||||| || ||||| ||||| || ||| | || ||
Sbjct 1090 ATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTGTCAATGGTGTCAGAACTCTCGACC 1031
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| | |||||| ||||| || || | || || ||||| ||||||||
Sbjct 1030 TCTAGAGTTATGGTCTTCCCAGTAAGAGTTTTCACAAAGATCTGCAT 984
Score = 134 bits (148), Expect = 3e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| ||||||| || ||||| | ||| || ||||| || || || || || ||||| |
Sbjct 982 CCACCTCTCAGGCGGAGAACAAGGTGGAGGGTAGACTCCTTTTGGATGTTGTAATCGGCC 923
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
| | | || || ||||| || || |||||||| || || || ||||| || |||||
Sbjct 922 AATGTCCGGCCATCCTCTAGCTGCTTGCCAGCAAATATGAGCCTCTGTTGGTCCGGAGGG 863
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| || ||||| || |||||||| ||||| ||||| ||||| ||||| | || ||
Sbjct 862 ATGCCCTCCTTGTCCTGAATCTTGGCTTTAACATTGTCAATGGTATCCGAACCCTCAACC 803
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| | || || |||||||| || | ||||||||||| ||||||||
Sbjct 802 TCGAGGGTGATAGTCTTGCCGGTGAGGGTCTTTACAAAGATCTGCAT 756
Score = 122 bits (134), Expect = 2e-22
Identities = 158/216 (73%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
||||| || | || ||||| |||||||| || || |||||||| | | | | ||
Sbjct 1654 CGCAGGACAAGATGAAGAGTGGATTCTTTTTGGATGTTATAATCTGCCAAGGTACGCCCA 1595
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
|| || || || || || |||||||| || || || ||||||||||| ||||| |||||
Sbjct 1594 TCCTCCAGCTGCTTCCCTGCAAAGATAAGCCTCTGCTGATCTGGAGGAATTCCCTCCTTG 1535
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTAT 82774
|| || ||||| || || ||||| || || || || || | || || || | ||| ||
Sbjct 1534 TCCTGGATCTTGGCCTTCACATTATCGATGGTGTC-GGAGCTCTCCACCTCAAGAGTAAT 1476
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || || || ||||| ||||| ||||||||
Sbjct 1475 GGTCTTTCCAGTTAATGTCTTGACAAAAATCTGCAT 1440
>seq1743593
Length=9171
Score = 127 bits (140), Expect = 4e-24
Identities = 157/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| || || | ||| |||||||| || ||||| || || ||||| | ||| | | |||
Sbjct 1328 CGGAGCACCAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAATCCGCCAGAGTGCGACCA 1387
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
|| || || || || ||||||||||| | || || || || || || || || |||||
Sbjct 1388 TCCTCAAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGGTCCGGGGGGATGCCCTCCTTG 1447
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
|| || ||||| || || || || || || || || || ||| || |||| || ||
Sbjct 1448 TCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCTGAAGATTCCACCTCCAGGGTGATG 1507
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||||| ||||| ||||| ||||| ||||||||
Sbjct 1508 GTCTTGCCAGTCAAGGTCTTGACAAAGATCTGCAT 1542
>seq41905
Length=7320
Score = 127 bits (140), Expect = 4e-24
Identities = 157/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| || || | ||| ||||||||||| ||||| || || || || | || | | ||
Sbjct 3207 CGAAGCACCAGGTGGAGAGTAGATTCCTTCTGGATGTTGTAGTCTGCCAGGGTGCGGCCA 3266
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
|| || || || || ||||||||||| || | || || || ||||| || || |||||
Sbjct 3267 TCCTCCAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTG 3326
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
|| || |||||||| || || || || || || ||| | || || |||||||| ||
Sbjct 3327 TCCTGGATCTTTGCCTTCACGTTGTCGATGGTGTCAGATGACTCCACCTCCAAAGTGATT 3386
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||||| || | ||||| ||||||||||||||
Sbjct 3387 GTCTTGCCGGTGAGGGTCTTCACAAATATCTGCAT 3421
Score = 102 bits (112), Expect = 2e-16
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || || ||||| || || || || ||||| || || || || | || | | ||
Sbjct 2978 ACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCC 3037
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
|| || || || || ||||| ||||| || | || || || || || || || |||||
Sbjct 3038 ATCCTCAAGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTT 3097
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
|| || ||||| || || || || || || || ||| | || || ||||| || ||
Sbjct 3098 GTCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCAGATGACTCCACCTCCAAGGTGAT 3157
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||||| || | ||||| ||||||||||||||
Sbjct 3158 AGTCTTGCCGGTGAGGGTCTTCACAAATATCTGCAT 3193
>seq765366
Length=14197
Score = 122 bits (134), Expect = 2e-22
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658
|| || | ||| || || || || ||||| ||||| ||||||| || | | || ||
Sbjct 789 AGCACCAGGTGAAGGGTTGACTCCTTCTGGATATTGTAATCAGCAAGGGTCCGTCCATCC 848
Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718
|| ||||| || ||||||||||| |||| || || || || || || || ||||||||
Sbjct 849 TCAAGTTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCCGGCGGGATGCCCTCCTTATCC 908
Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778
|| |||||||| || ||||| || ||||| ||| | || || || | || || |||
Sbjct 909 TGGATCTTTGCCTTGACATTGTCGATCGTGTCAGAGGACTCGACCTCAAGTGTGATGGTC 968
Query 82779 TTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || | ||||| || || ||||||||
Sbjct 969 TTGCCAGTGAGTGTCTTCACGAAGATCTGCAT 1000
>seq752332
Length=10290
Score = 122 bits (134), Expect = 2e-22
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| || | || |||||| || | ||| || || || || ||||| || || || ||||
Sbjct 5287 CCACCACGCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCG 5346
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | | || || || || || |||||||||||||| || | || || || |||||
Sbjct 5347 AGGGTACGGCCATCCTCCAGCTGCTTTCCAGCAAAGATGAGACGCTGCTGGTCCGGAGGA 5406
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| || ||||| || || ||||| || || ||||| ||||| || ||| | || ||
Sbjct 5407 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCAGACGACTCCACC 5466
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| | || || |||||||| |||| ||||| ||||| ||||||||
Sbjct 5467 TCAAGGGTGATGGTCTTGCCCGTCAGTGTCTTCACAAAGATCTGCAT 5513
>seq750497
Length=14261
Score = 122 bits (134), Expect = 2e-22
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658
|| |||||||| || || || || ||||| || || ||||| | || | | ||| ||
Sbjct 11079 AGCACTAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCCGCAAGGGTGCGACCATCC 11138
Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718
|| || || || || |||||||| || | ||| || ||||| || || || ||||| ||
Sbjct 11139 TCAAGCTGCTTGCCGGCAAAGATCAGGCGTTGCTGGTCTGGGGGAATGCCCTCCTTGTCC 11198
Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778
|| ||||| || || || || ||||| || ||| || || || |||| || || |||
Sbjct 11199 TGGATCTTGGCCTTGACGTTGTCAATGGTGTCAGAAGACTCAACCTCCAGGGTGATTGTC 11258
Query 82779 TTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| || || | ||||| ||||||||||||||
Sbjct 11259 TTCCCCGTGAGGGTCTTGACAAATATCTGCAT 11290
Score = 122 bits (134), Expect = 2e-22
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658
|| || ||||| || || || || ||||| || || || |||| || | | ||| ||
Sbjct 11307 AGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGACCATCC 11366
Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718
|| || || || ||||||||||| || | || || || || || || |||||||| ||
Sbjct 11367 TCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCTTCCTTGTCC 11426
Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778
|| |||||||| || ||||| ||||| || || | || ||||||| || || |||
Sbjct 11427 TGGATCTTTGCCTTGACATTGTCAATGGTGTCCGAGGACTCAACTTCCAGGGTGATGGTC 11486
Query 82779 TTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || | ||||| ||||| ||||||||
Sbjct 11487 TTGCCGGTGAGTGTCTTCACAAAGATCTGCAT 11518
Score = 105 bits (116), Expect = 1e-17
Identities = 153/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || || ||||| || || ||||| ||||| || || || || | | | | ||
Sbjct 10847 ACGGAGCACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCCGCCAAGGTGCGGCC 10906
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
|| || || || || ||||||||||| || | || || || || || || || |||||
Sbjct 10907 ATCCTCAAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTT 10966
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
|| |||||||| || || || || ||||| || ||| || || || |||| || ||
Sbjct 10967 GTCCTGAATCTTCGCCTTCACGTTGTCAATGGTGTCAGAAGACTCAACCTCCAGGGTGAT 11026
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || || | ||||| ||||| ||||||||
Sbjct 11027 GGTCTTCCCGGTGAGGGTCTTAACAAAAATCTGCAT 11062
>seq774391
Length=5162
Score = 113 bits (124), Expect = 9e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658
|| || | ||| || || || || ||||| || || || |||| | | | || ||
Sbjct 5025 AGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAAGGTGCGGCCATCC 4966
Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718
|| ||||| || ||||||||||| || | || || || ||||| || || ||||||||
Sbjct 4965 TCCAGTTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTATCC 4906
Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778
|| ||||| || || || || |||||||| ||| || || || || | || || |||
Sbjct 4905 TGGATCTTGGCCTTCACGTTGTCAATCGTGTCAGAAGACTCAACCTCGAGGGTGATGGTC 4846
Query 82779 TTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || | ||||| ||||| ||||||||
Sbjct 4845 TTGCCGGTGAGAGTCTTCACAAAGATCTGCAT 4814
>seq36911
Length=12065
Score = 104 bits (114), Expect = 4e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| || || | ||| || || || || ||||| || || || || | || | | ||
Sbjct 7540 CGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCA 7599
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
|| || | || || ||||||||||| || | || || || || || || || |||||
Sbjct 7600 TCCTCCAACTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGGGGGATCCCCTCCTTG 7659
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
|| || ||||| || || ||||| ||||| || ||| | || || |||| ||| ||
Sbjct 7660 TCCTGGATCTTCGCCTTGACATTGTCAATGGTGTCAGAACTCTCAACCTCCAGAGTGATA 7719
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||||| |||| ||||| ||||| ||||||||
Sbjct 7720 GTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCAT 7754
>seq5304
Length=2956
Score = 100 bits (110), Expect = 5e-16
Identities = 151/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| || || | |||||| || || || ||||| || || ||||| | ||| | | ||
Sbjct 687 CGGAGCACCAGGTGCAGGGTGGACTCCTTCTGAATGTTGTAATCTGCAAGAGTGCGGCCA 746
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
|| || || || || || |||||||| | | || || || ||| | || || |||||
Sbjct 747 TCCTCGAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGAAGGATGCCCTCCTTG 806
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
|| || ||||| || || ||||| ||||| || || | || || || | || ||
Sbjct 807 TCCTGGATCTTCGCCTTGACATTGTCAATTGTGTCGGAGGACTCAACCTCGAGGGTGATG 866
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||||||||| | ||||| ||||| ||||||||
Sbjct 867 GTCTTGCCTGTGAGGGTCTTCACAAAGATCTGCAT 901
>seq786636
Length=2743
Score = 95.1 bits (104), Expect = 2e-14
Identities = 133/187 (71%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 82624 TCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTA 82683
|||| || || || |||| || | || ||||| || || || || ||||| ||||| |
Sbjct 2743 TCTGGATGTTGTAGTCAGCAAGGGTCCTGCCGTCCTCAAGCTGCTTGCCAGCGAAGATGA 2684
Query 82684 GTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAA 82743
| | || || || || || || || ||||| || || || || || || || || || |
Sbjct 2683 GGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATTTTCGCCTTAACGTTGTCGA 2624
Query 82744 TCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATA 82803
| || ||| | || || || | || || |||||||||||||| ||||| ||||| |
Sbjct 2623 TGGTGTCAGACGACTCCACCTCAAGGGTGATGGTCTTGCCTGTCAATGTCTTCACAAAGA 2564
Query 82804 TCTGCAT 82810
|||||||
Sbjct 2563 TCTGCAT 2557
>seq76768
Length=7679
Score = 91.5 bits (100), Expect = 3e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| || || | ||| || || || || ||||| || || || |||| || | | ||
Sbjct 7517 CGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCA 7458
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
|| || || || || ||||||||||| || | || || || ||||| || || |||||
Sbjct 7457 TCCTCGAGCTGCTTGCCAGCAAAGATAAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTG 7398
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
|| || ||||| || || ||||| || || || || | || || || | || ||
Sbjct 7397 TCCTGGATCTTAGCCTTGACATTGTCGATGGTGTCCGAGGACTCGACCTCAAGGGTGATG 7338
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||||| || | ||||| || || ||||||||
Sbjct 7337 GTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 7303
>seq1745301
Length=2518
Score = 89.7 bits (98), Expect = 1e-12
Identities = 151/216 (70%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| || || | ||| || || || || ||||| || || || |||| || | | |||
Sbjct 48 CGGAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGACCA 107
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
|| || || || || ||||||||||| || | || || || ||||| || || |||||
Sbjct 108 TCCTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTG 167
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTAT 82774
|| || ||||| || || || || || || || || || | || || || | || ||
Sbjct 168 TCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTC-GGAGCTCTCAACCTCAAGGGTGAT 226
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||||| || | ||||| || || ||||||||
Sbjct 227 GGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 262
>seq7669
Length=6130
Score = 87.8 bits (96), Expect = 3e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667
|| || || || || ||||| || || || |||| || | | || || || || ||
Sbjct 5990 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCATCCTCAAGCTGC 5931
Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727
|| ||||||||||| || | || || || ||||| || || ||||| || || |||||
Sbjct 5930 TTGCCAGCAAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTC 5871
Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787
|| || || || ||||| || || | || || || | || || |||||||| ||
Sbjct 5870 GCCTTGACGTTGTCAATGGTGTCCGAGGACTCCACCTCAAGGGTGATGGTCTTGCCGGTG 5811
Query 82788 AACGTCTTTACAAATATCTGCAT 82810
| ||||| || || ||||||||
Sbjct 5810 AGGGTCTTAACGAAAATCTGCAT 5788
>seq5142
Length=9133
Score = 86.0 bits (94), Expect = 1e-11
Identities = 94/125 (75%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 82598 CAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTC 82657
||| || || || || || || || ||||| || || ||||||| || ||| || ||
Sbjct 2073 CAGGACCAAATGGAGCGTCGACTCCTTCTGAATGTTGTAATCAGCTAATGTTCGCCCATC 2014
Query 82658 TTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATC 82717
||| | || ||||||||||| ||||| ||||| |||||||| || || || ||||| ||
Sbjct 2013 TTCCAACTGCTTTCCAGCAAAAATTAGCCTTTGCTGATCTGGGGGAATGCCCTCCTTGTC 1954
Query 82718 TTGAA 82722
||||
Sbjct 1953 CTGAA 1949
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 958952092844380
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