Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20pubiflorum_20[genbank_20GCA_5F000582825.1_202013-08-30] 1,818,420 sequences; 1,425,274,558 total letters Query= NC_027398.1 Length=38742 Score E Sequences producing significant alignments: (Bits) Value seq747945 156 1e-33 >seq747945 Length=243 Score = 156 bits (172), Expect = 1e-33 Identities = 154/199 (77%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 34376 TGCTTATCTCGGTGGGCGATTTGGTTGATCGTGGTGCAGAGAACGTCGAATGCCTGGAAT 34435 |||| || ||||| || || | ||||| || || || || |||||||| |||||||| Sbjct 41 TGCTGATTTCGGTTGGAGACCTTGTTGACCGCGGCGCGGAAAACGTCGAGTGCCTGGAGC 100 Query 34436 TAATCACATTCCCCTGGTTCAGAGCTGTACGTGGAAACCATGAGCAAATGATGATTGATG 34495 | || || | || |||||| | ||||| || || ||||||||||| ||||||||||||| Sbjct 101 TGATTACTATGCCTTGGTTCCGGGCTGTGCGAGGTAACCATGAGCAGATGATGATTGATG 160 Query 34496 GCTTATCAGAGCGTGGAAACGTTAATCACTGGCTGCTTAATGGCGGTGGATGGTTCTTTA 34555 | |||| ||| |||||||||||| ||||||||| || ||||| | |||||||| | Sbjct 161 GGCTATCGGAGTATGGAAACGTTAACCACTGGCTGGAAAACGGCGGCGTGTGGTTCTTCA 220 Query 34556 ATCTCGATTACGACAAAGA 34574 ||| ||||| || ||||| Sbjct 221 GTCTTGATTATGAAAAAGA 239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 121178355148160