Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20pubiflorum_20[genbank_20GCA_5F000582825.1_202013-08-30] 1,818,420 sequences; 1,425,274,558 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq8128 116 3e-21 seq759537 105 6e-18 seq765366 102 7e-17 seq4499 100 2e-16 seq6362 98.7 8e-16 seq1748397 96.9 3e-15 seq77180 96.9 3e-15 seq7669 96.9 3e-15 seq41905 95.1 1e-14 seq786636 93.3 4e-14 seq1033180 91.5 1e-13 seq756917 91.5 1e-13 seq752332 91.5 1e-13 seq184930 91.5 1e-13 seq763663 89.7 4e-13 seq36911 89.7 4e-13 seq269176 87.8 2e-12 seq5304 87.8 2e-12 seq750497 86.0 5e-12 >seq8128 Length=3827 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 ||||| ||| || ||| ||| || || ||||| |||||||||||||| || | || || Sbjct 3273 CACCAGATGAAGGGTGGACTCCTTCTGGATATTGTAATCGGCAAGTGTCCGGCCATCCTC 3214 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 ||||| ||||||||||| || || ||||||||||| | || | || ||| |||||| Sbjct 3213 GAGCTGCTTGCCCGCAAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTG 3154 Query 39195 GATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 ||| || |||| | | | || ||| ||||| || || | ||||| | || Sbjct 3153 GATCTTTGCCTTGACATTGTCAATTGTGTCGGAGGACTCAACCTCAAGTGTGATGGTCTT 3094 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCATCT 39286 || ||||| || || |||||||| ||||||| Sbjct 3093 CCCGGTCAGAGTCTTCACAAAGATCTGCATCT 3062 Score = 89.7 bits (98), Expect = 4e-13 Identities = 150/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||||| ||| || || ||| || || || || ||||| || || || || | Sbjct 3507 GCGGAGCACCAGATGGAGAGTAGACTCCTTCTGAATGTTGTAATCCGCCAGAGTGCGACC 3448 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 ||| |||||||| ||||||||||| || | | ||||||||| | || | || ||| || Sbjct 3447 GTCCTCAAGCTGCTTGCCCGCAAAGATCAACCTCTGCTGGTCCGGAGGGATGCCCTCCTT 3388 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGAT 39248 |||| ||| ||| || | | | | ||||| ||||| || |||| || || Sbjct 3387 GTCCTGGATCTTCGCCTTCACATTGTCAATGGTATCCGAAGACTCGACCTCCAGAGTAAT 3328 Query 39249 ACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATC 39285 | || || || || ||||| || ||||| |||||| Sbjct 3327 GGTCTTGCCGGTGAGGGTTTTCACGAAGATCTGCATC 3291 >seq759537 Length=12225 Score = 105 bits (116), Expect = 6e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||||| ||||| ||| ||| || || ||||| ||||| || || || || | Sbjct 2640 GCGGAGCACCAGGTGTAGGGTGGACTCCTTCTGAATATTGTAATCCGCGAGAGTGCGGCC 2699 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 ||| || ||||| ||||| || || || || ||||||||||| | || | || ||| || Sbjct 2700 GTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTT 2759 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGAT 39248 |||| |||| ||| |||| | | | || ||| |||||||| || | ||||| Sbjct 2760 GTCCTTGATCTTCGCCTTGACATTGTCGATGGTGTCGGAGGACTCCACCTCGAGGGTGAT 2819 Query 39249 ACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCT 39286 | || || || || || || || ||||| ||||||| Sbjct 2820 GGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCATCT 2857 >seq765366 Length=14197 Score = 102 bits (112), Expect = 7e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||||| || || ||| ||| || || || || |||||||| || || || | Sbjct 557 GCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGCCAGGGTGCGCCC 616 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 || || ||||| ||||||||||| || | ||||||||||| | ||| | || ||| || Sbjct 617 ATCCTCGAGCTGCTTGCCCGCAAAGATCAACCGCTGCTGGTCCGGGGGGATGCCCTCCTT 676 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGAT 39248 |||| ||| ||| |||| | | | ||| ||| |||||||| || | ||||| Sbjct 677 GTCCTGGATCTTCGCCTTGACATTGTCAATCGTGTCGGAAGACTCCACCTCAAGAGTGAT 736 Query 39249 ACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | || || || || || || || ||||| ||||| Sbjct 737 GGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 772 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 ||||| || || || ||| || || ||||| ||||| ||||| || ||| | || || Sbjct 791 CACCAGGTGAAGGGTTGACTCCTTCTGGATATTGTAATCAGCAAGGGTCCGTCCATCCTC 850 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 ||| || ||||| ||||| || || ||||||||||| | || | || ||| || ||| Sbjct 851 AAGTTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCCGGCGGGATGCCCTCCTTATCCTG 910 Query 39195 GATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 ||| || |||| | | | ||| || ||||| || || | ||||| | || Sbjct 911 GATCTTTGCCTTGACATTGTCGATCGTGTCAGAGGACTCGACCTCAAGTGTGATGGTCTT 970 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCATCTTTAC 39290 || || || || || || ||||| ||||||| ||| Sbjct 971 GCCAGTGAGTGTCTTCACGAAGATCTGCATCTGTAC 1006 >seq4499 Length=5690 Score = 100 bits (110), Expect = 2e-16 Identities = 163/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 39057 GCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGC 39116 |||||| | | ||| | ||||| || || || ||| || || || || || ||||| Sbjct 643 GCCTCCGCGGAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGC 584 Query 39117 AAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGG 39176 || || || |||| || ||||| || || || || || || ||||||||||| | || Sbjct 583 GAGGGTGCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGCGG 524 Query 39177 CACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCA 39235 | || ||| |||||| ||| || |||| ||| | | | || || ||||||| Sbjct 523 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCCGAGGACTCCA 465 Query 39236 CGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCTT 39287 | |||| |||||| | || |||||||| || || || ||||| |||||||| Sbjct 464 CCTCCAGCGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 413 >seq6362 Length=4956 Score = 98.7 bits (108), Expect = 8e-16 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||||| || || ||| ||| || || || || || ||||| || || || | Sbjct 2963 GCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGAGTACGGCC 3022 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 ||| || ||||| ||||| || || || || ||||||||||| | || | | ||| || Sbjct 3023 GTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGGATCCCCTCCTT 3082 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGAT 39248 |||| ||| || |||| | | | || || ||||||||| || | |||||| Sbjct 3083 GTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCCGACGACTCCACCTCAAGCGTGAT 3142 Query 39249 ACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCTT 39287 | || |||||||| || || || ||||| |||||||| Sbjct 3143 GGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 3181 >seq1748397 Length=13441 Score = 96.9 bits (106), Expect = 3e-15 Identities = 155/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||||| || ||||| ||| || || || || || || || || || || | Sbjct 9745 GCGGAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCC 9804 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 ||| || ||||| ||||| || || || || ||||||||||| | || | || ||| || Sbjct 9805 GTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTT 9864 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGA 39247 |||| ||| || || | ||| | | | || || |||||||| |||| ||||| Sbjct 9865 GTCCTGGATCTTGGCCTTCA-CGTTGTCGATGGTGTCCGAGGACTCCACCTCCAACGTGA 9923 Query 39248 TACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCTT 39287 | | || |||||||| || || || ||||| |||||||| Sbjct 9924 TGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 9963 >seq77180 Length=12269 Score = 96.9 bits (106), Expect = 3e-15 Identities = 150/212 (71%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 |||| || ||||| ||| || || || || || ||||| || || || |||| || Sbjct 7138 ACCAGGTGCAGCGTAGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGCCCGTCCTCC 7079 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| || || || || || || ||||||||||| | || | | ||| |||||| | Sbjct 7078 AGCTGCTTCCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTGG 7019 Query 39196 ATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 || || || | ||| | | | ||| || ||||||||| || | |||||| | || Sbjct 7018 ATCTTGGCCTTCA-CGTTGTCGATCGTGTCCGACGACTCCACCTCAAGCGTGATCGTCTT 6960 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCATCT 39286 ||||||||||| || || ||||| ||||||| Sbjct 6959 CCCCGTCAGCGTCTTCACGAAGATCTGCATCT 6928 >seq7669 Length=6130 Score = 96.9 bits (106), Expect = 3e-15 Identities = 156/222 (70%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||||| ||| || ||| ||| || || || || || || || || || || | Sbjct 6003 GCGGAGCACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCC 5944 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 || |||||||| ||||| ||||| || || ||||||||||| | || | || ||| || Sbjct 5943 ATCCTCAAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTT 5884 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGA 39247 |||| ||| ||| |||| ||| | | | || || |||||||| || | |||| Sbjct 5883 GTCCTGGATCTTCGCCTTGA-CGTTGTCAATGGTGTCCGAGGACTCCACCTCAAGGGTGA 5825 Query 39248 TACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCTTTA 39289 | | || || || || || ||||| || || ||||||| || Sbjct 5824 TGGTCTTGCCGGTGAGGGTCTTAACGAAAATCTGCATCTGTA 5783 >seq41905 Length=7320 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 |||||| || || ||| ||| || || || || || ||||| || || || | || || Sbjct 2984 CACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCCTC 3043 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 |||||| || || || || || || ||||||||||| | ||| | || ||| |||||| Sbjct 3044 AAGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG 3103 Query 39195 GATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253 ||| ||| || | ||| | | | || || |||||||| |||| |||||| | | Sbjct 3104 GATCTTCGCCTTCA-CGTTGTCGATGGTGTCAGATGACTCCACCTCCAAGGTGATAGTCT 3162 Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | || || || || || ||||| || ||||| Sbjct 3163 TGCCGGTGAGGGTCTTCACAAATATCTGCAT 3193 >seq786636 Length=2743 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/188 (72%), Gaps = 2/188 (1%) Strand=Plus/Minus Query 39100 TGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGA 39159 || || || || || ||||| || | |||| |||||||| ||||| || || || || Sbjct 2741 TGGATGTTGTAGTCAGCAAGGGTCCTGCCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGG 2682 Query 39160 CGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCG-CCAC 39218 ||||||||||| | ||| | || ||| |||||| ||||||| | | | ||| | | | Sbjct 2681 CGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATTTTC-GCCTTAACGTTGTCGAT 2623 Query 39219 CGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGAT 39278 || || ||||||||| || | ||||| | || || |||| || || |||||||| Sbjct 2622 GGTGTCAGACGACTCCACCTCAAGGGTGATGGTCTTGCCTGTCAATGTCTTCACAAAGAT 2563 Query 39279 TTGCATCT 39286 ||||||| Sbjct 2562 CTGCATCT 2555 >seq1033180 Length=366 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | |||||| || || ||| ||| || || || || || || || || || || | Sbjct 54 GCGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCTGCTAGGGTGCGGCC 113 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 ||| |||||||| |||||||| || || || ||||||||||| | ||| | || ||| || Sbjct 114 GTCCTCAAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTT 173 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGAT 39248 |||| || ||| |||| | | | | | || ||||| || || | ||||| Sbjct 174 GTCCTGAATCTTCGCCTTGACATTGTCGATCATGTCAGAGGACTCAACCTCAAGGGTGAT 233 Query 39249 ACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCT 39286 | || || || || || || ||||| || ||||||| Sbjct 234 GGTCTTGCCGGTGAGGGTCTTCACAAAAATCTGCATCT 271 >seq756917 Length=3581 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||||| ||| || || ||| || || || || || || || || || || | Sbjct 309 GCGGAGCACCAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCTGCCAGAGTGCGGCC 250 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 || |||||||| ||||| ||||| || || ||||||||||| | ||| | || ||| || Sbjct 249 ATCCTCAAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTT 190 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGA 39247 |||| ||| ||| || | ||| | | | || || |||||||| |||| ||||| Sbjct 189 GTCCTGGATCTTCGCCTTCA-CGTTGTCGATGGTGTCTGAGGACTCCACCTCCAGCGTGA 131 Query 39248 TACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | | || || |||| || || || || || ||||| Sbjct 130 TGGTCTTGCCGGTCAAGGTCTTGACGAAAATCTGCAT 94 >seq752332 Length=10290 Score = 91.5 bits (100), Expect = 1e-13 Identities = 143/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || || || || || || | || || ||||| Sbjct 5311 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTACGGCCATCCTCCAGCTGC 5370 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 || || ||||| || |||||||||||||| | || | || ||| |||||| ||| || Sbjct 5371 TTTCCAGCAAAGATGAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTG 5430 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 |||| | | | || || ||||||||| || | ||||| | || |||||| Sbjct 5431 GCCTTGACATTGTCAATGGTGTCAGACGACTCCACCTCAAGGGTGATGGTCTTGCCCGTC 5490 Query 39262 AGCGTTTTAACAAAGATTTGCATCT 39286 || || || |||||||| ||||||| Sbjct 5491 AGTGTCTTCACAAAGATCTGCATCT 5515 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || || || || || || | || || ||||| ||||| ||||| Sbjct 4866 CTCCTTCTGGATGTTGTAGTCAGCGAGGGTACGGCCATCCTCCAGCTGCTTGCCGGCAAA 4925 Query 39153 TATAAGACGCTGCTGGT-CGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCG 39211 || || |||||||||| ||||||| | || ||| |||||| ||| || |||| Sbjct 4926 GATCAGGCGCTGCTGGTCCGGTGGG-ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACAT 4984 Query 39212 TCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAA 39271 | | | || || ||||||||| || | ||||| | || |||||||| || || | Sbjct 4985 TGTCGATGGTGTCAGACGACTCCACCTCAAGGGTGATGGTCTTGCCCGTCAGTGTCTTGA 5044 Query 39272 CAAAGATTTGCAT 39284 | ||||| ||||| Sbjct 5045 CGAAGATCTGCAT 5057 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/203 (70%), Gaps = 2/203 (1%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || || ||||| || || | || || ||||| Sbjct 5083 TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTACGGCCATCCTCCAGCTGC 5142 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || ||||| |||||||||||||| | || | || ||| |||||| ||| || Sbjct 5143 TTGCCAGCGAATATGAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTG 5202 Query 39202 TGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGT 39260 |||| ||| | | | |||||| |||||| |||| ||||| | || || || Sbjct 5203 GCCTTGA-CGTTGTCGATTGTATCGGAGCTCTCCACCTCCAAAGTGATGGTCTTGCCAGT 5261 Query 39261 CAGCGTTTTAACAAAGATTTGCA 39283 || || || || ||||| |||| Sbjct 5262 GAGGGTCTTCACGAAGATCTGCA 5284 >seq184930 Length=1266 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 |||||| || |||||| ||| || || || || || || || || || || | || || Sbjct 531 CACCAAGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGGGTGCGGCCATCCTC 472 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 |||||| || || || || || || ||||||||||| | ||| | || ||| |||||| Sbjct 471 AAGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG 412 Query 39195 GATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 ||| ||| || | | | | || || ||||| || |||| |||||| | || Sbjct 411 GATCTTCGCCTTCACATTGTCAATGGTGTCAGAAGACTCAACCTCCAAGGTGATAGTCTT 352 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || || || || |||||||| ||||| Sbjct 351 GCCGGTGAGGGTCTTGACAAAGATCTGCAT 322 >seq763663 Length=3499 Score = 89.7 bits (98), Expect = 4e-13 Identities = 154/220 (70%), Gaps = 8/220 (4%) Strand=Plus/Plus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||||| || || ||| || || || || || || || ||||| || || | Sbjct 2940 GCGGAGCACCAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCC 2999 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 ||| || ||||| ||||| || || ||||||||||||||||| | || | || ||| || Sbjct 3000 GTCCTCCAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCCGGCGGAATGCCCTCCTT 3059 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATC---GCTCGACTCCACGTCCACCG 39244 |||| ||| || |||| ||| | | | || || ||| ||| || |||| | Sbjct 3060 GTCCTGGATCTTGGCCTTGA-CGTTGTCAATGGTGTCTGAGCT---CTCAACCTCCAGAG 3115 Query 39245 TGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 ||||| | || || || || || || |||||||| ||||| Sbjct 3116 TGATAGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 3155 >seq36911 Length=12065 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || |||||||| ||||| || || | || || ||||| ||||| ||||| Sbjct 7791 CTCCTTCTGGATGTTATAATCAGCAAGGGTACGGCCATCCTCCAGCTGCTTGCCAGCAAA 7850 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || ||||||||||| | ||| | || ||| |||||| ||| || |||| | Sbjct 7851 AATGAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 7910 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | || ||| || ||||| || | ||||| | || || || || || || || Sbjct 7911 GTCAATGGTGTCGGAGGATTCCACCTCAAGTGTGATGGTCTTGCCGGTGAGGGTCTTGAC 7970 Query 39273 AAAGATTTGCAT 39284 |||||| ||||| Sbjct 7971 AAAGATCTGCAT 7982 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||||| || || ||| ||| || || || || || ||||| || || || | Sbjct 7539 GCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCC 7598 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 || || | ||| ||||| ||||| || || ||||||||||| | ||| | | ||| || Sbjct 7599 ATCCTCCAACTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGGGGGATCCCCTCCTT 7658 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGAT 39248 |||| ||| ||| |||| | | | || || ||| || |||| ||||| Sbjct 7659 GTCCTGGATCTTCGCCTTGACATTGTCAATGGTGTCAGAACTCTCAACCTCCAGAGTGAT 7718 Query 39249 ACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | | || || ||||| || || |||||||| ||||| Sbjct 7719 AGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCAT 7754 >seq269176 Length=4233 Score = 87.8 bits (96), Expect = 2e-12 Identities = 153/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||||| || ||||| ||| || || | || || ||||| || || || | Sbjct 1163 GCGGAGCACCAGGTGCAGCGTCGACTCCTTCTGCACGTTGTAGTCGGCCAGCGTGCGGCC 1222 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 ||| || ||||| || || | || || || ||||||||||| | || | | ||| || Sbjct 1223 GTCCTCCAGCTGCTTCCCGACGAAGATGAGCCGCTGCTGGTCCGGCGGGATCCCCTCCTT 1282 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGA 39247 |||| ||| || |||| ||| | | | || ||||| |||||| |||| |||| Sbjct 1283 GTCCTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCGCTGCTCTCCACCTCCAGGGTGA 1341 Query 39248 TACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCTT 39287 | | || |||||||| || || || ||||| |||||||| Sbjct 1342 TCGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 1381 >seq5304 Length=2956 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||||| || || ||| ||| || || || || ||||| ||||| || || | Sbjct 686 GCGGAGCACCAGGTGCAGGGTGGACTCCTTCTGAATGTTGTAATCTGCAAGAGTGCGGCC 745 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 || || ||||| ||||| ||||| || | ||||||||||| | | | || ||| || Sbjct 746 ATCCTCGAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGAAGGATGCCCTCCTT 805 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGAT 39248 |||| ||| ||| |||| | | | || ||| ||||| || || | ||||| Sbjct 806 GTCCTGGATCTTCGCCTTGACATTGTCAATTGTGTCGGAGGACTCAACCTCGAGGGTGAT 865 Query 39249 ACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCT 39286 | || || || || || || |||||||| ||||||| Sbjct 866 GGTCTTGCCTGTGAGGGTCTTCACAAAGATCTGCATCT 903 >seq750497 Length=14261 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 |||||| || || ||| ||| || || || || || || ||||| || || | || || Sbjct 11309 CACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGACCATCCTC 11368 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 ||||| ||||| ||||| || || ||||||||||| | ||| | || || |||||| Sbjct 11369 GAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCTTCCTTGTCCTG 11428 Query 39195 GATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 ||| || |||| | | | || || ||||| || |||| ||||| | || Sbjct 11429 GATCTTTGCCTTGACATTGTCAATGGTGTCCGAGGACTCAACTTCCAGGGTGATGGTCTT 11488 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || || || || |||||||| ||||| Sbjct 11489 GCCGGTGAGTGTCTTCACAAAGATCTGCAT 11518 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 ||||| || || ||| ||| || || || || || || || || || || | || || Sbjct 11537 CACCAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGAGTGCGCCCATCCTC 11596 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 |||||| ||||| || || || |||||||||||||| | || | || ||| |||||| Sbjct 11597 AAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTG 11656 Query 39195 GATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 ||| || |||| | | | || || ||||| || || | ||||| | || Sbjct 11657 GATCTTGGCCTTGACATTGTCGATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTT 11716 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCATCTTTA 39289 || || || || || |||||||| ||||||| || Sbjct 11717 GCCGGTGAGGGTCTTCACAAAGATCTGCATCTGTA 11751 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420026013097460