Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20pubiflorum_20[genbank_20GCA_5F000582825.1_202013-08-30] 1,818,420 sequences; 1,425,274,558 total letters Query= NC_031005.1 Length=29338 Score E Sequences producing significant alignments: (Bits) Value seq1742705 279 9e-71 >seq1742705 Length=226 Score = 279 bits (308), Expect = 9e-71 Identities = 191/226 (85%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 8274 GGCGGCCCATCTTAATGGTTGGCAGCGCCCGTTTGAGTGNNNNNNNNNNNNNNNNNNNNN 8333 ||||||||| || |||||||||||||||||||||||||| Sbjct 226 GGCGGCCCACCTGAATGGTTGGCAGCGCCCGTTTGAGTGGTGTGAGTGGGCTGTACTGGA 167 Query 8334 NNNNNNNNNNCATTACAGGTCTGCTAATAGTGAGGGGCAGCCGGAGCCTGTGGCGAGGCC 8393 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 166 CATGTTGGATCATTACAGGTCTGCTAATAGTGAGGGGCAGCCGGAGCCTGTGGCGAGGCC 107 Query 8394 TACGGATGAGCGTAGGGCCAGGTTTACGTCTGGGCAGGTGGACGATATTTTGGCGCGTGT 8453 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 106 TACGGATGAGCGTAGGGCCCGGTTTACGTCTGGGCAGGTGGACGATATTTTGGCGCGTGT 47 Query 8454 TCGTGCTGGTGGCGGGGTGTCTCGCGAGATTAATATTATGGGGTGA 8499 |||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 46 TCGTGCCGGTGGCGGGGTGTCTCGCGAGATTAATATTATGGGGTGA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 91735371172000