Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_001604.1 Length=39937 Score E Sequences producing significant alignments: (Bits) Value seq28963 87.8 4e-13 >seq28963 Length=574 Score = 87.8 bits (96), Expect = 4e-13 Identities = 120/168 (71%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 15775 GACGCATCCGGTCTTGAGCTACGCTGCTTGGCTCACTTCATGGCTCGCTTTGATAACGGC 15834 ||||| || || | ||||| |||||| |||| ||||||||||| || |||| Sbjct 168 GACGCCTCGGGATTGGAGCTGCGCTGCCTGGCGCACTTCATGGCAAAGCACGACGGCGGC 109 Query 15835 GAGTACGCTCACGAGATTCTTAACGGCGACATCCACACTAAGAACCAGATAGCTGCTGAA 15894 |||||||| | | || || | |||||||||||| | ||||| || || | | Sbjct 108 GAGTACGCCAAGGTCATCCTCGAAGGCGACATCCACTCCGTCAACCAATCGGCGGCAGGA 49 Query 15895 CTACCTACCCGAGATAACGCTAAGACGTTCATCTATGGGTTCCTCTAT 15942 || || ||||| || ||||| ||||| |||||||| | ||||||||| Sbjct 48 CTGCCAACCCGCGACAACGCCAAGACCTTCATCTACGCCTTCCTCTAT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124526365464038