Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_002167.1 Length=39732 Score E Sequences producing significant alignments: (Bits) Value seq2072468 89.7 1e-13 >seq2072468 Length=291 Score = 89.7 bits (98), Expect = 1e-13 Identities = 85/109 (78%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 15744 AAGATCGGCGACACGATGATGCTGCAGAGCTTCACCGAGGTGATTGATGCCAAACTGCGC 15803 ||||||| |||||| ||| || || | | ||| ||||| || || ||||| |||||| Sbjct 136 AAGATCGCCGACACCATGCTGGTGGCCGGTTGCACAGAGGTCATCGACGCCAAGCTGCGC 77 Query 15804 TACCCGAACACCGCGCTGCTCTACGTCGAATTCGACTCAAGCCAGTTCA 15852 || ||||| || |||||||||||| ||||||||||| | ||||||| Sbjct 76 TATCCGAATACTGCGCTGCTCTACATCGAATTCGACGCTGAACAGTTCA 28 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123886552312828