Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq13084 87.8 1e-12 >seq13084 Length=9463 Score = 87.8 bits (96), Expect = 1e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 20431 CAATTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATG 20490 || ||||| || | ||| ||||| || ||||| |||||||| || || ||||| ||| Sbjct 5200 CAGTTTTATGTCGAGAATGGAGAATTATCCTGTCAGATGTATCAGCGTTCAGCTGACATG 5141 Query 20491 GGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACAT 20550 || || ||||| || ||||| |||||| ||| | || || || | |||||||||||| Sbjct 5140 GGGCTTGGTGTACCATTCAACATTGCATCATATTCTCTTCTGACATGTATGATTGCACAA 5081 Query 20551 GTT 20553 ||| Sbjct 5080 GTT 5078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 389074897350445