Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_
202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq232690 138 9e-28
seq260872 136 3e-27
seq138594 123 2e-23
seq102963 123 2e-23
seq139869 116 3e-21
seq138792 113 3e-20
seq362679 111 1e-19
seq218242 111 1e-19
seq1978033 107 1e-18
seq852532 104 2e-17
seq980325 102 6e-17
seq948143 102 6e-17
seq878454 100 2e-16
seq839203 100 2e-16
seq95629 98.7 8e-16
seq19311 98.7 8e-16
seq1142613 95.1 9e-15
seq176325 93.3 3e-14
seq95597 86.0 5e-12
>seq232690
Length=472
Score = 138 bits (152), Expect = 9e-28
Identities = 156/208 (75%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192
|||||||||| ||||||||| | |||||||||| ||| ||| |||| ||||| ||
Sbjct 51 GTGCAGCGTGA-CTCCTTCTGGACGTTGTAGTCGGCCAGCGTGCGGCCGTCCTCCAGCTG 109
Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252
|| |||||||| || | |||||| ||||| || || | |||||||||||| || ||
Sbjct 110 CTTCCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTGGATCTT 169
Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312
||| || | | | |||| | | ||||||||||| ||| || |||||||||||
Sbjct 170 GGCCTTGACGTTGTCGATGGTGTCGCTGCTCTCCACCTCCAGGGTGATGGTCTTGCCCGT 229
Query 45313 CAGAGTCTTCACAAAGATTTGCATGTTG 45340
||| ||||| || ||||| ||||| |||
Sbjct 230 CAGGGTCTTGACGAAGATCTGCATCTTG 257
>seq260872
Length=904
Score = 136 bits (150), Expect = 3e-27
Identities = 155/208 (75%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192
||||||||| ||||||||| | |||||||||| ||| ||| |||| ||||| ||
Sbjct 880 GTGCAGCGTCGACTCCTTCTGGACGTTGTAGTCGGCCAGCGTGCGGCCGTCCTCCAGCTG 821
Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252
|| |||||||| || | ||||| ||||| || || | |||||||||||| || ||
Sbjct 820 CTTCCCGGCGAAGATGAGTCGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTGGATCTT 761
Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312
||| || | | | |||| | | ||||||||||| ||| ||||||||||||||
Sbjct 760 GGCCTTGACGTTGTCGATGGTGTCGCTGCTCTCCACCTCCAGGGTGATCGTCTTGCCCGT 701
Query 45313 CAGAGTCTTCACAAAGATTTGCATGTTG 45340
||| ||||| || ||||| ||||| |||
Sbjct 700 CAGGGTCTTGACGAAGATCTGCATCTTG 673
>seq138594
Length=2879
Score = 123 bits (136), Expect = 2e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| ||| || ||| ||||||||| |||||||||||| || ||| |||| ||
Sbjct 43 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCG 102
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || |||||||| || | ||||| ||||| || || | ||||||||||||
Sbjct 103 AGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGG 162
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | ||||| ||||||||||| || || ||||||
Sbjct 163 ATCTTGGCCTTGACGTTGTCGATGGTGTCCGACGACTCCACCTCCAGCGTGATGGTCTTG 222
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340
|||||||| |||||||| ||||| ||||| |||
Sbjct 223 CCCGTCAGGGTCTTCACGAAGATCTGCATCTTG 255
>seq102963
Length=6263
Score = 123 bits (136), Expect = 2e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| ||| || ||| ||||||||| |||||||||||| || ||| |||| ||
Sbjct 3496 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCG 3437
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || |||||||| || | ||||| ||||| || || | ||||||||||||
Sbjct 3436 AGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGG 3377
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | ||||| ||||||||||| || || ||||||
Sbjct 3376 ATCTTGGCCTTGACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCTTG 3317
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340
|||||||| |||||||| ||||| ||||| |||
Sbjct 3316 CCCGTCAGGGTCTTCACGAAGATCTGCATCTTG 3284
>seq139869
Length=4701
Score = 116 bits (128), Expect = 3e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||||||| || ||| ||||||||| ||||||||||| || ||| | || ||
Sbjct 981 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCAAGGGTGCGGCCATCCTCA 922
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || |||||||| ||||| ||||| ||||| || || | |||||||||||| |
Sbjct 921 AGCTGCTTACCGGCGAAGATCAAGCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGA 862
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| ||| ||| || | | | |||| | ||| ||||||| ||| || |||||
Sbjct 861 ATCTTTGCCTTCACGTTGTCAATGGTGTCAGAAGACTCAACCTCCAGGGTGATGGTCTTC 802
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| || || ||||| ||||| || |||||
Sbjct 801 CCGGTGAGGGTCTTGACAAAAATCTGCAT 773
Score = 102 bits (112), Expect = 6e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||||||| || ||| |||||||| |||||||| || || ||| | || ||
Sbjct 753 ACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAATCCGCAAGGGTGCGGCCATCCTCA 694
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || |||||||| |||| ||||| ||||| || || | ||||||||||||
Sbjct 693 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGG 634
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | ||||| ||| ||||||| ||| || ||||||
Sbjct 633 ATCTTGGCCTTGACATTATCAATGGTGTCCGAGGACTCAACCTCCAAGGTGATGGTCTTG 574
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| || || |||||||| ||||| |||||
Sbjct 573 CCGGTGAGTGTCTTCACGAAGATCTGCAT 545
Score = 98.7 bits (108), Expect = 8e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||||||| || ||| ||||||||| ||||||||||| ||| ||| | || ||
Sbjct 525 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGAGTGCGCCCATCCTCA 466
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || || ||||| || | ||||| ||||| || || | ||||||||||||
Sbjct 465 AGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGG 406
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | |||| | ||| ||||| | ||| || |||||
Sbjct 405 ATCTTGGCCTTGACATTGTCAATGGTGTCAGAAGACTCGACCTCAAGGGTGATGGTCTTC 346
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| || || |||||||| ||||| |||||
Sbjct 345 CCGGTGAGGGTCTTCACGAAGATCTGCAT 317
>seq138792
Length=3226
Score = 113 bits (124), Expect = 3e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||||||| || ||| ||||||||||||||||||||| || || | || ||
Sbjct 287 ACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCCGCCAAGGTACGGCCATCCTCA 228
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || || || || || | ||||| ||||| || || | || |||||||||
Sbjct 227 AGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGGGGGAATGCCTTCCTTGTCCTGG 168
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| ||| ||| || | | | ||||| | ||||||||||| || || ||||||
Sbjct 167 ATCTTTGCCTTCACATTGTCGATGGTGTCCGAAGACTCCACCTCCAATGTGATGGTCTTG 108
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
||||| || ||||| |||||||||||||||
Sbjct 107 CCCGTGAGGGTCTTTACAAAGATTTGCATG 78
>seq362679
Length=1828
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| ||| || ||| ||||||||| ||||||||||| || ||| | || |||
Sbjct 1504 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAAGGTGCGGCCATCCTCC 1445
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
||||| || || ||||| || | ||||| ||||| ||||| | ||||||||||||
Sbjct 1444 AGTTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGG 1385
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || |||||| | | |||| | ||| ||||| | ||| || ||||||
Sbjct 1384 ATCTTGGCCTTAACGTTGTCGATCGTGTCAGAAGACTCAACCTCGAGGGTGATGGTCTTG 1325
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| || || |||||||||||||| |||||
Sbjct 1324 CCGGTGAGTGTCTTCACAAAGATCTGCAT 1296
Score = 109 bits (120), Expect = 4e-19
Identities = 147/205 (72%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192
||| || ||| ||||||||| ||||||||||| ||| ||| | || || || ||
Sbjct 1727 GTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGGGTGCGGCCATCTTCGAGCTG 1668
Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252
|| |||||||| |||| ||||| ||||| ||||| | |||||||||||| || ||
Sbjct 1667 CTTACCGGCGAAGATCAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTT 1608
Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312
||| || | | | ||||| ||| ||||| | ||| || |||||||| ||
Sbjct 1607 GGCCTTGACGTTGTCGATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCGGT 1548
Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337
|||||||| ||||| || ||||||
Sbjct 1547 GAGAGTCTTAACAAATATCTGCATG 1523
>seq218242
Length=2478
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| ||| || ||| ||||||||| |||||||||||| || ||| | || |||
Sbjct 1906 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGGCCATCCTCC 1847
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
| || || || || || |||| |||||| ||||| || || | ||||||||||||
Sbjct 1846 AACTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCAGGGGGGATCCCCTCCTTGTCCTGG 1787
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | |||| || ||| ||||||| || || |||||
Sbjct 1786 ATCTTCGCCTTGACATTGTCAATGGTGTCAGAACTCTCAACCTCCAAAGTGATGGTCTTC 1727
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| ||||| |||||||||||||| |||||
Sbjct 1726 CCGGTCAGGGTCTTCACAAAGATCTGCAT 1698
>seq1978033
Length=13150
Score = 107 bits (118), Expect = 1e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||||||| || || |||||||||||||||||| || || |||| | || ||
Sbjct 5491 ACCAAGTGGAGAGTAGACTCCTTCTGAATGTTGTAATCTGCAAGAGTGCGACCATCCTCA 5432
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || || || || |||| ||||| ||||| || || | ||||||||||||
Sbjct 5431 AGCTGCTTACCTGCAAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGG 5372
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | ||||| | |||||||||| ||| || ||||||
Sbjct 5371 ATCTTAGCCTTCACATTGTCAATGGTGTCCGAAGATTCCACCTCCAGGGTGATGGTCTTG 5312
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| || || ||||| || |||||||||||
Sbjct 5311 CCAGTAAGGGTCTTGACGAAGATTTGCAT 5283
Score = 87.8 bits (96), Expect = 1e-12
Identities = 147/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| ||| || || ||| ||||| |||||||| || || ||| | || ||
Sbjct 5263 ACCAGGTGGAGGGTAGACTCTTTCTGGATGTTGTAATCAGCTAGGGTGCGCCCATCCTCA 5204
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || ||||| || ||||| ||||| ||||| || || | ||||||| | |||
Sbjct 5203 AGCTGCTTGCCGGCAAAGATCAATCGCTGCTGGTCCGGCGGGATACCCTCCATATCCTGG 5144
Query 45248 ATTTTTTGCTTAACCGCCGCCACGC-TGTCCCCACCCTCCACCTCCACGGTAATCGTCTT 45306
|| || ||| || | | || | |||| | ||| ||||| | ||| || |||||
Sbjct 5143 ATCTTGGCCTTGAC-GTTGTCAATCGTGTCAGAAGACTCAACCTCGAGGGTGATGGTCTT 5085
Query 45307 GCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
||| || || |||||||||||||| |||||
Sbjct 5084 GCCGGTGAGGGTCTTCACAAAGATCTGCAT 5055
>seq852532
Length=3118
Score = 104 bits (114), Expect = 2e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| ||||||| | |||||||| ||| |||||||| ||| ||| |||| |||
Sbjct 1133 ACCAGGTGCAGCATCGACTCCTTCTAGATGCTGTAGTCGGCCAGCGTGCGGCCGTCCTCC 1192
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || || |||| || | |||||| ||||| | || | ||||||||||||
Sbjct 1193 AGCTGCTTCCCAACGAAGATGAGCCGCTGCTGGTCCAGCGGGATCCCCTCCTTGTCCTGG 1252
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | |||| | | ||||||||||| ||| |||||||||
Sbjct 1253 ATCTTGGCCTTGACATTGTCGATGGTGTCGCTGCTCTCCACCTCCAGGGTGATCGTCTTG 1312
Query 45308 CCCGTCAGAGTCTTCAC 45324
||| |||| ||||| ||
Sbjct 1313 CCCATCAGGGTCTTGAC 1329
>seq980325
Length=977
Score = 102 bits (112), Expect = 6e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| ||| || ||| ||||||||| ||||||||||| || |||| | || |||
Sbjct 769 ACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCAAGGGTGCGACCATCCTCC 828
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || |||||||| |||| ||||| || || || || | ||||||||||||
Sbjct 829 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGG 888
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | |||| | ||| ||||||| || || |||||
Sbjct 889 ATCTTGGCCTTGACATTGTCAATGGTGTCAGAGCTCTCAACCTCCAGAGTGATGGTCTTC 948
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| ||||| ||||| || ||||| |||||
Sbjct 949 CCAGTCAGGGTCTTGACGAAGATCTGCAT 977
>seq948143
Length=1505
Score = 102 bits (112), Expect = 6e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| ||| || ||| ||||||||||||||||||||| || ||| | || |||
Sbjct 314 ACCAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCCGCAAGGGTGCGGCCATCCTCC 255
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || |||||||| |||| ||||| ||||| || || | ||||||||||||
Sbjct 254 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGG 195
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | |||| ||||||||| | || || ||||||
Sbjct 194 ATCTTGGCCTTGACGTTGTCAATGGTGTCGGACGACTCCACCTCAAGAGTGATAGTCTTG 135
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| || || ||||| || ||||| |||||
Sbjct 134 CCAGTGAGGGTCTTGACGAAGATCTGCAT 106
>seq878454
Length=5435
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| ||| || ||| ||||||||| |||||||| || ||| ||| | || ||
Sbjct 1042 ACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCTGCCAGGGTGCGGCCATCCTCA 983
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || ||||| || || | ||||| ||||| || || | ||||||||||||
Sbjct 982 AGCTGCTTGCCGGCAAAGATAAGTCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGG 923
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | ||||| ||||||||||| ||| || ||||||
Sbjct 922 ATCTTCGCCTTCACATTGTCGATGGTGTCCGAGGACTCCACCTCCAAGGTGATGGTCTTG 863
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|| || || |||||||| || || ||||||
Sbjct 862 CCTGTGAGGGTCTTCACGAAAATCTGCATG 833
Score = 93.3 bits (102), Expect = 3e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| ||| || ||| ||||||||| ||||| ||||| ||| ||| | || ||
Sbjct 814 ACCAGGTGGAGAGTGGACTCCTTCTGGATGTTATAGTCAGCCAGGGTGCGGCCATCCTCG 755
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || ||||| || || | ||||| ||||| || || | || ||||| |||
Sbjct 754 AGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCTTCCTTATCCTGG 695
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| ||| ||| || | | | |||| ||||||||| | ||| || ||||||
Sbjct 694 ATCTTTGCCTTCACGTTGTCGATGGTGTCAGAGGACTCCACCTCAAGGGTGATGGTCTTG 635
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|||||||| ||||| || ||||| |||||
Sbjct 634 CCCGTCAGGGTCTTGACGAAGATCTGCAT 606
>seq839203
Length=7618
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||||||| || || |||||||||||||||||| || || || | |||||
Sbjct 701 ACCAAGTGGAGTGTAGACTCCTTCTGAATGTTGTAATCCGCAAGAGTACGGCCATCGTCG 760
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || |||||||| |||| ||||| ||||| || || | ||||||||||||
Sbjct 761 AGCTGCTTACCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGG 820
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| ||| ||| || | | |||| | |||||||||| ||| || ||||||
Sbjct 821 ATCTTTGCCTTCACGTTGTGAATGGTGTCTGAAGATTCCACCTCCAAGGTGATTGTCTTG 880
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|| || || ||||| || || || ||||||
Sbjct 881 CCAGTAAGGGTCTTGACGAAAATCTGCATG 910
>seq95629
Length=7091
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/226 (70%), Gaps = 1/226 (0%)
Strand=Plus/Plus
Query 45111 CACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCA 45170
|||| ||||| | | || | ||| || ||| |||||||||||||||||| || ||
Sbjct 3545 CACCCCTCAACCGAAGAACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGCCA 3604
Query 45171 GTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCA 45230
||| | || ||||| |||| | || || || | || ||||||||| | || |
Sbjct 3605 AGGTGCGGCCATCTTCCAGCTGTTCCGCAGCAAAGATAAGCCTCTGTTGGTCTGCTGGGA 3664
Query 45231 CACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCT 45290
||||||||||||| | | ||||| | || | | | ||||| || || |||||
Sbjct 3665 TACCCTCCTTGTCCTGGA-TCTTTGCCTTACATTGTCAATGTTGTCCGAACTCTACACCT 3723
Query 45291 CCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
| | || || ||||| || || ||||| ||||||||||| |||||
Sbjct 3724 CTATAGTTATGGTCTTCCCGGTAAGAGTTTTCACAAAGATCTGCAT 3769
>seq19311
Length=2760
Score = 98.7 bits (108), Expect = 8e-16
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204
||||||||| ||||| |||||| ||| ||| | || || || || || || || ||
Sbjct 2755 CTCCTTCTGGATGTTATAGTCGGCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAA 2696
Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264
|| | ||||| ||||| ||||| | |||||||||||| || || ||| ||
Sbjct 2695 GATGAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTAGCCTTGACGTT 2636
Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324
| | | ||||| ||| ||||| | ||| || |||||||| ||||| ||||||||
Sbjct 2635 GTCGATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 2576
Query 45325 AAAGATTTGCAT 45336
|||||| |||||
Sbjct 2575 AAAGATCTGCAT 2564
>seq1142613
Length=436
Score = 95.1 bits (104), Expect = 9e-15
Identities = 147/209 (70%), Gaps = 1/209 (0%)
Strand=Plus/Minus
Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188
|||| || || ||| ||||||||| ||||||||||| || || | || ||||
Sbjct 322 CAAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTACGGCCATCCTCCA 263
Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248
| || || || || || || | ||||| ||||| ||||| | |||||||||||| |
Sbjct 262 GCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGA 203
Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308
| || ||| || | | | |||| | ||| ||||||| || || |||||||
Sbjct 202 TCTTGGCCTTGACATTGTCGATGGTGTCTGAGCTCTCAACCTCCAGAGTGATGGTCTTGC 143
Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCATG 45337
| || || |||||||||||||| ||||||
Sbjct 142 CAGTAAGGGTCTTCACAAAGATCTGCATG 114
>seq176325
Length=1574
Score = 93.3 bits (102), Expect = 3e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||||||| || || ||||||||| ||||||||||| ||| ||| | || ||
Sbjct 221 ACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGCCAGAGTGCGGCCATCCTCA 162
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || || || || || | ||||| ||||| || || | ||||||||||||
Sbjct 161 AGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCCTGG 102
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| ||| ||| || | | | |||| ||| ||||||| ||| || ||||||
Sbjct 101 ATCTTTGCCTTCACATTGTCGATGGTGTCAGATGACTCAACCTCCAGGGTGATGGTCTTG 42
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| || || ||||| || ||||| |||||
Sbjct 41 CCAGTGAGGGTCTTAACGAAGATCTGCAT 13
>seq95597
Length=7948
Score = 86.0 bits (94), Expect = 5e-12
Identities = 100/135 (74%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
||||| || | || | |||||||| || || |||||||||||||||||||||
Sbjct 2540 CCACCCCTGAGCCTGAGGACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCAGCA 2481
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
||| ||| | || |||| || || || || |||||||| ||||| ||||| |||||
Sbjct 2480 AGTGTGCGTCCATCCTCCAACTGCTTGCCAGCAAATATCAAACGCTGCTGGTCCGGAGGA 2421
Query 45230 ACACCCTCCTTGTCC 45244
| || |||||||||
Sbjct 2420 ATCCCTTCCTTGTCC 2406
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385070150320921
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |