Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq13084 89.7 1e-12 >seq13084 Length=9463 Score = 89.7 bits (98), Expect = 1e-12 Identities = 85/107 (79%), Gaps = 4/107 (4%) Strand=Plus/Minus Query 35608 TCAATTTTATGTGGCTAATGGAGAATTGTCGTGCCAGTTGTATCAGCGA--AGCGGAGAT 35665 ||| |||||||| | ||||||||||| || || ||| |||||||||| ||| || || Sbjct 5201 TCAGTTTTATGTCGAGAATGGAGAATTATCCTGTCAGATGTATCAGCGTTCAGCTGACAT 5142 Query 35666 GTCGGGTTGGGCGTGCCCTTCAATATTGCATCATACTCTCTTCTGAC 35712 | ||| | || || || ||||| ||||||||||| ||||||||||| Sbjct 5141 G--GGGCTTGGTGTACCATTCAACATTGCATCATATTCTCTTCTGAC 5097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 963238199715455