Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_
202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters
Query= NC_003315.1
Length=31508
Score E
Sequences producing significant alignments: (Bits) Value
seq5904 116 7e-22
seq6105 95.1 2e-15
>seq5904
Length=257
Score = 116 bits (128), Expect = 7e-22
Identities = 73/79 (92%), Gaps = 0/79 (0%)
Strand=Plus/Plus
Query 356 ATTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTAC 415
||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct 79 ATTGGTGGGCCGTGAAGGATTCGAACCTTCGACCAAAAGATTAAAAGTCTTCTGCTCTAC 138
Query 416 CGACTGAGCTAACGACCCA 434
|||||||||||||| ||||
Sbjct 139 CGACTGAGCTAACGGCCCA 157
>seq6105
Length=249
Score = 95.1 bits (104), Expect = 2e-15
Identities = 67/77 (87%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 357 TTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACC 416
|||||||||| || ||||||||||| ||||||| ||||||||||| ||||||||||
Sbjct 208 TTGGTGGGTCCTGCGGGATTCGAACCCGCGACCAATAGATTAAAAGTCTACTGCTCTACC 149
Query 417 GACTGAGCTAACGACCC 433
||||||||||| |||||
Sbjct 148 GACTGAGCTAAAGACCC 132
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 98219121310140
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |