Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq980070 89.7 4e-13 >seq980070 Length=1613 Score = 89.7 bits (98), Expect = 4e-13 Identities = 117/162 (72%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 21018 GTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCCCATGTCGGCGGACCTC 21077 ||||| ||||||||| ||||| || || || || |||||| ||||||||| | | Sbjct 443 GTCAGCAGGGCGTAGGAAGCGATATTGAAGGGCACGCCGAGGAAGATGTCGGCGCTGCGC 502 Query 21078 TGGTACAGCTGGCAGGACAGCTCCCCCCGAGCCACGTAAAACTGACACAAAACGTGACAA 21137 ||||| |||||||||||||||| || |||||||| ||||| | || |||| || Sbjct 503 TGGTAGAGCTGGCAGGACAGCTTGCCGTCGGCCACGTAGAACTGGAAGAAGGCGTGGCAG 562 Query 21138 GGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTCCACGCG 21179 || || || |||| ||| | ||| || |||||| ||| Sbjct 563 GGCGGCAGCTTCATCTGCGGCACGTCGGCCACGTTCCAGGCG 604 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 416942821578480